Extensive and spatially variable within-cell-type heterogeneity across the basolateral amygdala

Extraction of Distinct Neuronal Cell Types from within a Genetically Continuous Population

(2020) Euiseok J. Kim et al.   NEURON

A Sparse, Spatially Biased Subtype of Mature Granule Cell Dominates Recruitment in Hippocampal-Associated Behaviors

(2020) Sarah R. Erwin et al.   Cell Reports

Distinct Cortical-Thalamic-Striatal Circuits through the Parafascicular Nucleus

(2019) Gil Mandelbaum et al.   NEURON

Heterogeneity within classical cell types is the rule: lessons from hippocampal pyramidal neurons

(2019) Mark S. Cembrowski et al.   NATURE REVIEWS NEUROSCIENCE

A repeated molecular architecture across thalamic pathways

(2019) James W. Phillips et al.   NATURE NEUROSCIENCE

Single-cell transcriptomics as a framework and roadmap for understanding the brain

(2019) Mark S. Cembrowski   JOURNAL OF NEUROSCIENCE METHODS

Continuous and Discrete Neuron Types of the Adult Murine Striatum

(2019) Geoffrey Stanley et al.   NEURON

Reciprocal connectivity between secondary auditory cortical field and amygdala in mice

(2019) Hiroaki Tsukano et al.   Scientific Reports

Dissociable Structural and Functional Hippocampal Outputs via Distinct Subiculum Cell Classes

(2018) Mark S. Cembrowski et al.   CELL

Vigilance-Associated Gamma Oscillations Coordinate the Ensemble Activity of Basolateral Amygdala Neurons

(2018) Alon Amir et al.   NEURON

Continuous Variation within Cell Types of the Nervous System

(2018) Mark S. Cembrowski et al.   TRENDS IN NEUROSCIENCES

Organization of Valence-Encoding and Projection-Defined Neurons in the Basolateral Amygdala

(2018) Anna Beyeler et al.   Cell Reports

Classes and continua of hippocampal CA1 inhibitory neurons revealed by single-cell transcriptomics

(2018) Kenneth D. Harris et al.   PLOS BIOLOGY

Molecular Architecture of the Mouse Nervous System

(2018) Amit Zeisel et al.   CELL

Multi-dimensional Coding by Basolateral Amygdala Neurons

(2018) Pinelopi Kyriazi et al.   NEURON

Distinct descending motor cortex pathways and their roles in movement

(2018) Michael N. Economo et al.   NATURE

Dimensionality reduction for visualizing single-cell data using UMAP

(2018) Etienne Becht et al.   NATURE BIOTECHNOLOGY

The subiculum is a patchwork of discrete subregions

(2018) Mark S Cembrowski et al.   eLife

Amygdala inputs to prefrontal cortex guide behavior amid conflicting cues of reward and punishment

(2017) Anthony Burgos-Robles et al.   NATURE NEUROSCIENCE

Neuronal cell-type classification: challenges, opportunities and the path forward

(2017) Hongkui Zeng et al.   NATURE REVIEWS NEUROSCIENCE

Detecting Activated Cell Populations Using Single-Cell RNA-Seq

(2017) Ye Emily Wu et al.   NEURON

Integrating Results across Methodologies Is Essential for Producing Robust Neuronal Taxonomies

(2017) Mark S. Cembrowski et al.   NEURON

The promise of spatial transcriptomics for neuroscience in the era of molecular cell typing

(2017) Ed Lein et al.   SCIENCE

Prefrontal Cortex Drives Distinct Projection Neurons in the Basolateral Amygdala

(2017) Laura M. McGarry et al.   Cell Reports

Antagonistic negative and positive neurons of the basolateral amygdala

(2016) Joshua Kim et al.   NATURE NEUROSCIENCE

Selective synaptic remodeling of amygdalocortical connections associated with fear memory

(2016) Yang Yang et al.   NATURE NEUROSCIENCE

Divergent Routing of Positive and Negative Information from the Amygdala during Memory Retrieval

(2016) Anna Beyeler et al.   NEURON

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons

(2016) D. Gowanlock R. Tervo et al.   NEURON

Spatial Gene-Expression Gradients Underlie Prominent Heterogeneity of CA1 Pyramidal Neurons

(2016) Mark S. Cembrowski et al.   NEURON

DREADDs for Neuroscientists

(2016) Bryan L. Roth   NEURON

Bidirectional modulation of anxiety-related and social behaviors by amygdala projections to the medial prefrontal cortex

(2016) A.C. Felix-Ortiz et al.   NEUROSCIENCE

Organization of connections between the amygdala, medial prefrontal cortex, and lateral hypothalamus: a single and double retrograde tracing study in rats

(2015) Christina J. Reppucci et al.   Brain Structure & Function

A circuit mechanism for differentiating positive and negative associations

(2015) Praneeth Namburi et al.   NATURE

From circuits to behaviour in the amygdala

(2015) Patricia H. Janak et al.   NATURE

Spatial reconstruction of single-cell gene expression data

(2015) Rahul Satija et al.   NATURE BIOTECHNOLOGY

Neuronal circuits for fear and anxiety

(2015) Philip Tovote et al.   NATURE REVIEWS NEUROSCIENCE

The basolateral amygdala in reward learning and addiction

(2015) Kate M. Wassum et al.   NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS

Amygdala Inputs to the Ventral Hippocampus Bidirectionally Modulate Social Behavior

(2014) A. C. Felix-Ortiz et al.   JOURNAL OF NEUROSCIENCE

A mesoscale connectome of the mouse brain

(2014) Seung Wook Oh et al.   NATURE

Long-Range Connectivity Defines Behavioral Specificity of Amygdala Neurons

(2014) Verena Senn et al.   NEURON

Synaptic Mechanisms Underlying Strong Reciprocal Connectivity between the Medial Prefrontal Cortex and Basolateral Amygdala

(2013) J. P. Little et al.   JOURNAL OF NEUROSCIENCE

Diverging neural pathways assemble a behavioural state from separable features in anxiety

(2013) Sung-Yon Kim et al.   NATURE

BLA to vHPC Inputs Modulate Anxiety-Related Behaviors

(2013) Ada C. Felix-Ortiz et al.   NEURON

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

The structure of Pavlovian fear conditioning in the amygdala

(2012) Hadley C. Bergstrom et al.   Brain Structure & Function

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Amygdala circuitry mediating reversible and bidirectional control of anxiety

(2011) Kay M. Tye et al.   NATURE

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain

(2009) Linda Madisen et al.   NATURE NEUROSCIENCE

Exploration and visualization of gene expression with neuroanatomy in the adult mouse brain

(2008) Christopher Lau et al.   BMC BIOINFORMATICS

Switching on and off fear by distinct neuronal circuits

(2008) Cyril Herry et al.   NATURE