Insights into the genetic basis of predator‐induced response in Daphnia galeata

Sensory Ecology of Predator-Induced Phenotypic Plasticity

(2019) Linda C. Weiss   Frontiers in Behavioral Neuroscience

Contrasting patterns of divergence at the regulatory and sequence level in European Daphnia galeata natural populations

(2019) Suda Parimala Ravindran et al.   Ecology and Evolution

Variation in transcriptional responses to copper exposure across Daphnia pulex lineages

(2019) Frédéric J.J. Chain et al.   AQUATIC TOXICOLOGY

5α-cyprinol sulfate, a bile salt from fish, induces diel vertical migration in Daphnia

(2019) Meike Anika Hahn et al.   eLife

A fossil-calibrated phylogenomic analysis of Daphnia and the Daphniidae

(2019) Luca Cornetti et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Dissecting the Transcriptomic Basis of Phenotypic Evolution in an Aquatic Keystone Grazer

(2019) Dagmar Frisch et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative Transcriptome Analysis for Understanding Predator-Induced Polyphenism in the Water Flea Daphnia pulex

(2018) Haein An et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Intraspecific phenotypic variation in life history traits of Daphnia galeata populations in response to fish kairomones

(2018) Verena Tams et al.   PeerJ

Gene Coexpression Networks Drive and Predict Reproductive Effects in Daphnia in Response to Environmental Disturbances

(2017) J. Asselman et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Mechanisms underlying the control of responses to predator odours in aquatic prey

(2017) Matthew D. Mitchell et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Population transcriptomics in Daphnia : The role of thermal selection

(2017) Maike Herrmann et al.   MOLECULAR ECOLOGY

Contrasting gene expression programs correspond with predator-induced phenotypic plasticity within and across generations in Daphnia

(2017) Nicole R. Hales et al.   MOLECULAR ECOLOGY

Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean-specific genes

(2017) Luisa Orsini et al.   MOLECULAR ECOLOGY

Biomechanical properties of predator-induced body armour in the freshwater crustacean Daphnia

(2017) Sebastian Kruppert et al.   Scientific Reports

De Novo Transcriptome Assembly and Sex-Biased Gene Expression in the Cyclical ParthenogeneticDaphnia galeata

(2016) Ann Kathrin Huylmans et al.   Genome Biology and Evolution

Onset of kairomone sensitivity and the development of inducible morphological defenses in Daphnia pulex

(2016) Linda C. Weiss et al.   HYDROBIOLOGIA

Inducible Defenses with a "Twist": Daphnia barbata Abandons Bilateral Symmetry in Response to an Ancient Predator

(2016) Quirin Herzog et al.   PLoS One

Predation and anthropogenic impact on community structure of boulder beaches

(2016) Marcela Aldana et al.   SCIENTIA MARINA

Ecological and Evolutionary Drivers of Geographic Variation in Species Diversity

(2015) Paul V.A. Fine   Annual Review of Ecology Evolution and Systematics

Transcriptional profiling of predator-induced phenotypic plasticity in Daphnia pulex

(2015) Andrey Rozenberg et al.   Frontiers in Zoology

Synergistic interactions of biotic and abiotic environmental stressors on gene expression

(2015) Ianina Altshuler et al.   GENOME

Coupling of anti-predator defences in Daphnia: the importance of light

(2015) Christoph Effertz et al.   HYDROBIOLOGIA

Interclonal proteomic responses to predator exposure inDaphnia magnamay depend on predator composition of habitats

(2015) Kathrin A. Otte et al.   MOLECULAR ECOLOGY

Predators drive community structure in coral reef fish assemblages

(2015) A. E. Boaden et al.   Ecosphere

Predator-Mediated Natural Selection on the Wings of the Damselfly Calopteryx splendens: Differences in Selection among Trait Types

(2014) Shawn R. Kuchta et al.   AMERICAN NATURALIST

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

jvenn: an interactive Venn diagram viewer

(2014) Philippe Bardou et al.   BMC BIOINFORMATICS

Genome-Wide Transcription Profiles Reveal Genotype-Dependent Responses of Biological Pathways and Gene-Families in Daphnia Exposed to Single and Mixed Stressors

(2014) Dieter I. M. De Coninck et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Transcriptional profiling of reproductive development, lipid storage and molting throughout the last juvenile stage of the marine copepod Calanus finmarchicus

(2014) Ann M Tarrant et al.   Frontiers in Zoology

Natural selection in novel environments: predation selects for background matching in the body colour of a land fish

(2013) Courtney L. Morgans et al.   ANIMAL BEHAVIOUR

NextGenMap: fast and accurate read mapping in highly polymorphic genomes

(2013) Fritz J. Sedlazeck et al.   BIOINFORMATICS

Uncovering Ultrastructural Defences in Daphnia magna – An Interdisciplinary Approach to Assess the Predator-Induced Fortification of the Carapace

(2013) Max Rabus et al.   PLoS One

Molecular mechanisms of tolerance to cyanobacterial protease inhibitors revealed by clonal differences inDaphnia magna

(2012) Anke Schwarzenberger et al.   MOLECULAR ECOLOGY

Linking genes to communities and ecosystems: Daphnia as an ecogenomic model

(2012) B. E. Miner et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

PREDATOR-INDUCED DEFENSE MAKES DAPHNIA MORE VULNERABLE TO PARASITES

(2011) Mingbo Yin et al.   EVOLUTION

Trophic Downgrading of Planet Earth

(2011) James A. Estes et al.   SCIENCE

Target gene approaches: Gene expression in Daphnia magna exposed to predator-borne kairomones or to microcystin-producing and microcystin-free Microcystis aeruginosa

(2009) Anke Schwarzenberger et al.   BMC GENOMICS

Interpreting the smells of predation: how alarm cues and kairomones induce different prey defences

(2009) Nancy M. Schoeppner et al.   FUNCTIONAL ECOLOGY

Sugar sweet springtails: on the transcriptional response ofFolsomia candida(Collembola) to desiccation stress

(2009) M. J. T. N. Timmermans et al.   INSECT MOLECULAR BIOLOGY

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

The scale of divergence: A phylogenetic appraisal of intercontinental allopatric speciation in a passively dispersed freshwater zooplankton genus

(2008) Sarah J. Adamowicz et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION