Identification of effector candidate genes of Rhizoctonia solani AG-1 IA expressed during infection in Brachypodium distachyon

The fungal ribonuclease-like effector protein CSEP0064/BEC1054 represses plant immunity and interferes with degradation of host ribosomal RNA

(2019) Helen G. Pennington et al.   PLoS Pathogens

A LysM effector protein from the basidiomycete Rhizoctonia solani contributes to virulence through suppression of chitin-triggered immunity

(2019) Fredrik Dölfors et al.   MOLECULAR GENETICS AND GENOMICS

Integrative transcriptome analysis discloses the molecular basis of a heterogeneous fungal phytopathogen complex, Rhizoctonia solani AG-1 subgroups

(2019) Naoki Yamamoto et al.   Scientific Reports

Cyclophilins: Less Studied Proteins with Critical Roles in Pathogenesis

(2018) Khushwant Singh et al.   PHYTOPATHOLOGY

Transcriptome landscape of a bacterial pathogen under plant immunity

(2018) Tatsuya Nobori et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The plant-specific transcription factors CBP60g and SARD1 are targeted by a Verticillium secretory protein VdSCP41 to modulate immunity

(2018) Jun Qin et al.   eLife

Benzothiadiazole, a plant defense inducer, negatively regulates sheath blight resistance in Brachypodium distachyon

(2018) Yusuke Kouzai et al.   Scientific Reports

Verticillium dahliaeLysM effectors differentially contribute to virulence on plant hosts

(2017) Anja Kombrink et al.   MOLECULAR PLANT PATHOLOGY

Salicylic acid-dependent immunity contributes to resistance against Rhizoctonia solani , a necrotrophic fungal agent of sheath blight, in rice and Brachypodium distachyon

(2017) Yusuke Kouzai et al.   NEW PHYTOLOGIST

Transcriptome analysis reveals the host selection fitness mechanisms of the Rhizoctonia solani AG1IA pathogen

(2017) Yuan Xia et al.   Scientific Reports

Expression profiling of marker genes responsive to the defence-associated phytohormones salicylic acid, jasmonic acid and ethylene in Brachypodium distachyon

(2016) Yusuke Kouzai et al.   BMC PLANT BIOLOGY

Proteomic Analysis ofRhizoctonia solaniIdentifies Infection-specific, Redox Associated Proteins and Insight into Adaptation to Different Plant Hosts

(2016) Jonathan P. Anderson et al.   MOLECULAR & CELLULAR PROTEOMICS

Elucidating the Role of Effectors in Plant-Fungal Interactions: Progress and Challenges

(2016) Carrie Selin et al.   Frontiers in Microbiology

Effector P: predicting fungal effector proteins from secretomes using machine learning

(2015) Jana Sperschneider et al.   NEW PHYTOLOGIST

Gene expression profiling of candidate virulence factors in the laminated root rot pathogen Phellinus sulphurascens

(2014) Holly L Williams et al.   BMC GENOMICS

Plant hormones in defense response of Brassica napus to Sclerotinia sclerotiorum – Reassessing the role of salicylic acid in the interaction with a necrotroph

(2014) Miroslava Nováková et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The role of effectors and host immunity in plant–necrotrophic fungal interactions

(2014) Xuli Wang et al.   Virulence

Expression Profiling during Arabidopsis/Downy Mildew Interaction Reveals a Highly-Expressed Effector That Attenuates Responses to Salicylic Acid

(2014) Shuta Asai et al.   PLoS Pathogens

Effectors and Effector Delivery in Magnaporthe oryzae

(2014) Shijie Zhang et al.   PLoS Pathogens

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Host-induced gene silencing of wheat leaf rust fungus Puccinia triticina pathogenicity genes mediated by the Barley stripe mosaic virus

(2013) Vinay Panwar et al.   PLANT MOLECULAR BIOLOGY

The evolution and pathogenic mechanisms of the rice sheath blight pathogen

(2013) Aiping Zheng et al.   Nature Communications

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Primer3—new capabilities and interfaces

(2012) Andreas Untergasser et al.   NUCLEIC ACIDS RESEARCH

Tomato immune receptor Ve1 recognizes effector of multiple fungal pathogens uncovered by genome and RNA sequencing

(2012) R. de Jonge et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tricking the Guard: Exploiting Plant Defense for Disease Susceptibility

(2012) J. Lorang et al.   SCIENCE

How filamentous pathogens co-opt plants: the ins and outs of fungal effectors

(2011) Ronnie de Jonge et al.   CURRENT OPINION IN PLANT BIOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Proteinaceous necrotrophic effectors in fungal virulence

(2010) Kar-Chun Tan et al.   FUNCTIONAL PLANT BIOLOGY

CYP1, a hypovirus-regulated cyclophilin, is required for virulence in the chestnut blight fungus

(2010) MIN-MEI CHEN et al.   MOLECULAR PLANT PATHOLOGY

A unique wheat disease resistance-like gene governs effector-triggered susceptibility to necrotrophic pathogens

(2010) J. D. Faris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PredGPI: a GPI-anchor predictor

(2008) Andrea Pierleoni et al.   BMC BIOINFORMATICS

The novelCladosporium fulvumlysin motif effector Ecp6 is a virulence factor with orthologues in other fungal species

(2008) Melvin D. Bolton et al.   MOLECULAR MICROBIOLOGY