Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples
Authors
Keywords
-
Journal
Nature Communications
Volume 11, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-09-21
DOI
10.1038/s41467-020-18151-y
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
- (2020) Esther Rheinbay et al. NATURE
- Pan-cancer analysis of whole genomes
- (2020) NATURE
- Whole Exome Sequencing of Ulcerative Colitis–associated Colorectal Cancer Based on Novel Somatic Mutations Identified in Chinese Patients
- (2019) Pengguang Yan et al. INFLAMMATORY BOWEL DISEASES
- Whole-Exome Sequencing Identifies Somatic Mutations Associated With Mortality in Metastatic Clear Cell Kidney Carcinoma
- (2019) Alejandro Mendoza-Alvarez et al. Frontiers in Genetics
- Genomic alterations accompanying tumour evolution in colorectal cancer: tracking the differences between primary tumours and synchronous liver metastases by whole-exome sequencing
- (2018) M. B. Mogensen et al. BMC CANCER
- Comprehensive Characterization of Cancer Driver Genes and Mutations
- (2018) Matthew H. Bailey et al. CELL
- Genome Evolution Analysis of Recurrent Testicular Malignant Mesothelioma by Whole-Genome Sequencing
- (2018) Shigeng Zhang et al. CELLULAR PHYSIOLOGY AND BIOCHEMISTRY
- Whole-genome and Transcriptome Sequencing of Prostate Cancer Identify New Genetic Alterations Driving Disease Progression
- (2018) Shancheng Ren et al. EUROPEAN UROLOGY
- Whole-genome sequencing offers additional but limited clinical utility compared with reanalysis of whole-exome sequencing
- (2018) Ahmed Alfares et al. GENETICS IN MEDICINE
- Are whole-exome and whole-genome sequencing approaches cost-effective? A systematic review of the literature
- (2018) Katharina Schwarze et al. GENETICS IN MEDICINE
- Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines
- (2018) Kyle Ellrott et al. Cell Systems
- Mutational mechanisms of amplifications revealed by analysis of clustered rearrangements in breast cancers
- (2018) D Głodzik et al. ANNALS OF ONCOLOGY
- Early Noninvasive Detection of Response to Targeted Therapy in Non-Small Cell Lung Cancer
- (2018) Jillian Phallen et al. CANCER RESEARCH
- Whole exome sequencing identifies a germline MET mutation in two siblings with hereditary wild-type RET medullary thyroid cancer
- (2017) Marialuisa Sponziello et al. HUMAN MUTATION
- An integrated computational and experimental study uncovers FUT9 as a metabolic driver of colorectal cancer
- (2017) Noam Auslander et al. Molecular Systems Biology
- Complex heatmaps reveal patterns and correlations in multidimensional genomic data
- (2016) Zuguang Gu et al. BIOINFORMATICS
- Landscape of somatic mutations in 560 breast cancer whole-genome sequences
- (2016) Serena Nik-Zainal et al. NATURE
- Systematic discovery of complex insertions and deletions in human cancers
- (2015) Kai Ye et al. NATURE MEDICINE
- Whole-genome sequencing is more powerful than whole-exome sequencing for detecting exome variants
- (2015) Aziz Belkadi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Performance comparison of four exome capture systems for deep sequencing
- (2014) Chandra Sekhar Chilamakuri et al. BMC GENOMICS
- Comprehensive characterization of complex structural variations in cancer by directly comparing genome sequence reads
- (2014) Valentí Moncunill et al. NATURE BIOTECHNOLOGY
- A general framework for estimating the relative pathogenicity of human genetic variants
- (2014) Martin Kircher et al. NATURE GENETICS
- Sequencing depth and coverage: key considerations in genomic analyses
- (2014) David Sims et al. NATURE REVIEWS GENETICS
- RADIA: RNA and DNA Integrated Analysis for Somatic Mutation Detection
- (2014) Amie J. Radenbaugh et al. PLoS One
- Performance of Common Analysis Methods for Detecting Low-Frequency Single Nucleotide Variants in Targeted Next-Generation Sequence Data
- (2013) David H. Spencer et al. JOURNAL OF MOLECULAR DIAGNOSTICS
- Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
- (2013) Kristian Cibulskis et al. NATURE BIOTECHNOLOGY
- BEDOPS: high-performance genomic feature operations
- (2012) Shane Neph et al. BIOINFORMATICS
- MuSiC: Identifying mutational significance in cancer genomes
- (2012) N. D. Dees et al. GENOME RESEARCH
- VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
- (2012) D. C. Koboldt et al. GENOME RESEARCH
- Absolute quantification of somatic DNA alterations in human cancer
- (2012) Scott L Carter et al. NATURE BIOTECHNOLOGY
- SomaticSniper: identification of somatic point mutations in whole genome sequencing data
- (2011) David E. Larson et al. BIOINFORMATICS
- Initial genome sequencing and analysis of multiple myeloma
- (2011) Michael A. Chapman et al. NATURE
- Performance comparison of exome DNA sequencing technologies
- (2011) Michael J Clark et al. NATURE BIOTECHNOLOGY
- Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor
- (2010) William McLaren et al. BIOINFORMATICS
- Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads
- (2009) K. Ye et al. BIOINFORMATICS
- Genetic diagnosis by whole exome capture and massively parallel DNA sequencing
- (2009) Murim Choi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More