MMEJ-KO: a web tool for designing paired CRISPR guide RNAs for microhomology-mediated end joining fragment deletion

Design and analysis of CRISPR–Cas experiments

(2020) Ruth E. Hanna et al.   NATURE BIOTECHNOLOGY

Efficient CRISPR/Cas9‐based plant genomic fragment deletions by microhomology‐mediated end joining

(2020) Jiantao Tan et al.   PLANT BIOTECHNOLOGY JOURNAL

Microhomologies are prevalent at Cas9-induced larger deletions

(2019) Dominic D G Owens et al.   NUCLEIC ACIDS RESEARCH

CRISPR-Cas9-based mutagenesis frequently provokes on-target mRNA misregulation

(2019) Rubina Tuladhar et al.   Nature Communications

CRISPR-GE: A Convenient Software Toolkit for CRISPR-Based Genome Editing

(2017) Xianrong Xie et al.   Molecular Plant

Targeting non-coding RNAs with the CRISPR/Cas9 system in human cell lines

(2014) Tsui-Ting Ho et al.   NUCLEIC ACIDS RESEARCH

BatMis: a fast algorithm for k-mismatch mapping

(2012) Chandana Tennakoon et al.   BIOINFORMATICS