The role of disulfide bonds in a Solanum tuberosum saposin-like protein investigated using molecular dynamics
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
The role of disulfide bonds in a Solanum tuberosum saposin-like protein investigated using molecular dynamics
Authors
Keywords
Disulfide bonds, Dimers, Salt bridges, Hydrogen bonding, Molecular dynamics, Monomers, Cysteine, Protein structure
Journal
PLoS One
Volume 15, Issue 8, Pages e0237884
Publisher
Public Library of Science (PLoS)
Online
2020-08-26
DOI
10.1371/journal.pone.0237884
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Mechanism of glucocerebrosidase activation and dysfunction in Gaucher disease unraveled by molecular dynamics and deep learning
- (2019) Raquel Romero et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- All-Atom Molecular Dynamics Simulations of Dimeric Lung Surfactant Protein B in Lipid Multilayers
- (2019) Nicholas A. S. Robichaud et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Crystal structure of saposin D in an open conformation
- (2018) Ahmad Gebai et al. JOURNAL OF STRUCTURAL BIOLOGY
- The mechanism of glycosphingolipid degradation revealed by a GALC-SapA complex structure
- (2018) Chris H. Hill et al. Nature Communications
- pH dependent membrane binding of the Solanum tuberosum plant specific insert: An in silico study
- (2018) John H. Dupuis et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
- Protein Structure Insights into the Bilayer Interactions of the Saposin-Like Domain of Solanum tuberosum Aspartic Protease
- (2017) Brian C. Bryksa et al. Scientific Reports
- Characterizing the Size and Composition of Saposin A Lipoprotein Picodiscs
- (2016) Jun Li et al. ANALYTICAL CHEMISTRY
- Computer simulations of lung surfactant
- (2016) Svetlana Baoukina et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
- All-atom molecular dynamics simulations of lung surfactant protein B: Structural features of SP-B promote lipid reorganization
- (2016) Mohammad Hassan Khatami et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
- Solution Structure of Acidocin B, a Circular Bacteriocin Produced by Lactobacillus acidophilus M46
- (2015) Jeella Z. Acedo et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Identification, Characterization, and Three-Dimensional Structure of the Novel Circular Bacteriocin, Enterocin NKR-5-3B, from Enterococcus faecium
- (2015) Kohei Himeno et al. BIOCHEMISTRY
- In Silico Insights into Protein-Protein Interactions and Folding Dynamics of the Saposin-Like Domain of Solanum tuberosum Aspartic Protease
- (2014) Dref C. De Moura et al. PLoS One
- Solution Structures of the Linear Leaderless Bacteriocins Enterocin 7A and 7B Resemble Carnocyclin A, a Circular Antimicrobial Peptide
- (2013) Christopher T. Lohans et al. BIOCHEMISTRY
- Motional timescale predictions by molecular dynamics simulations: Case study using proline and hydroxyproline sidechain dynamics
- (2013) Abil E. Aliev et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Discovering the Bacterial Circular Proteins: Bacteriocins, Cyanobactins, and Pilins
- (2012) Manuel Montalbán-López et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Cholesterol and membrane phospholipid compositions modulate the leakage capacity of the swaposin domain from a potato aspartic protease (StAsp-PSI)
- (2011) Fernando Muñoz et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS
- The conserved disulfide bond of human tear lipocalin modulates conformation and lipid binding in a ligand selective manner
- (2011) Oktay K. Gasymov et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- Toward a Predictive Understanding of Slow Methyl Group Dynamics in Proteins
- (2011) Dong Long et al. BIOPHYSICAL JOURNAL
- Structure and Mechanism of the Saposin-like Domain of a Plant Aspartic Protease
- (2011) Brian C. Bryksa et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- NMR-Based Protein Potentials
- (2010) Da-Wei Li et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- The swaposin-like domain of potato aspartic protease (StAsp-PSI) exerts antimicrobial activity on plant and human pathogens
- (2010) Fernando F. Muñoz et al. PEPTIDES
- Improved side-chain torsion potentials for the Amber ff99SB protein force field
- (2010) Kresten Lindorff-Larsen et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- A Stretch of 17 Amino Acids in the Prosaposin C Terminus Is Critical for Its Binding to Sortilin and Targeting to Lysosomes
- (2009) Libin Yuan et al. JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY
- Solution structure and calcium binding of protein SSO6904 from the hyperthermophilic archaeonSulfolobus solfataricus
- (2009) Yingang Feng et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Crystal Structures of Human Saposins C and D: Implications for Lipid Recognition and Membrane Interactions
- (2008) Maxim Rossmann et al. STRUCTURE
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now