An Optimized Mouse Brain Atlas for Automated Mapping and Quantification of Neuronal Activity Using iDISCO+ and Light Sheet Fluorescence Microscopy

The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas

(2020) Quanxin Wang et al.   CELL

Tissue Clearing and Light Sheet Microscopy: Imaging the Unsectioned Adult Zebra Finch Brain at Cellular Resolution

(2019) Mariana Diales Rocha et al.   Frontiers in Neuroanatomy

Regional vulnerability and spreading of hyperphosphorylated tau in seeded mouse brain

(2019) Jan R. Detrez et al.   NEUROBIOLOGY OF DISEASE

Regulation of Energy Expenditure by Brainstem GABA Neurons

(2019) Marc Schneeberger et al.   CELL

Quantitative whole-brain 3D imaging of tyrosine hydroxylase-labeled neuron architecture in the mouse MPTP model of Parkinson's disease

(2019) Urmas Roostalu et al.   Disease Models & Mechanisms

Enhanced and unified anatomical labeling for a common mouse brain atlas

(2019) Uree Chon et al.   Nature Communications

Optimizing tissue-clearing conditions based on analysis of the critical factors affecting tissue-clearing procedures

(2018) June Hoan Kim et al.   Scientific Reports

Integrated Brain Atlas for Unbiased Mapping of Nervous System Effects Following Liraglutide Treatment

(2018) Casper Bo Gravesen Salinas et al.   Scientific Reports

Evaluation of seven optical clearing methods in mouse brain

(2018) Peng Wan et al.   Neurophotonics

PYY(3-36) and exendin-4 reduce food intake and activate neuronal circuits in a synergistic manner in mice

(2018) Marina Kjaergaard et al.   NEUROPEPTIDES

Mouse Models of Alzheimer’s Disease

(2017) Gisela Esquerda-Canals et al.   JOURNAL OF ALZHEIMERS DISEASE

Neuroscience in the third dimension: shedding new light on the brain with tissue clearing

(2017) Robin J. Vigouroux et al.   Molecular Brain

Mapping of Brain Activity by Automated Volume Analysis of Immediate Early Genes

(2016) Nicolas Renier et al.   CELL

Three-Dimensional Study of Alzheimer’s Disease Hallmarks Using the iDISCO Clearing Method

(2016) Thomas Liebmann et al.   Cell Reports

Mouse Genetic Models of Human Brain Disorders

(2016) Celeste Leung et al.   Frontiers in Genetics

Lipofuscin, lipofuscin-like pigments and autofluorescence

(2015) G. Di Guardo   EUROPEAN JOURNAL OF HISTOCHEMISTRY

Neuroinformatics of the Allen Mouse Brain Connectivity Atlas

(2015) Leonard Kuan et al.   METHODS

Dido mutations trigger perinatal death and generate brain abnormalities and behavioral alterations in surviving adult mice

(2015) Ricardo Villares et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

iDISCO: A Simple, Rapid Method to Immunolabel Large Tissue Samples for Volume Imaging

(2014) Nicolas Renier et al.   CELL

The arcuate nucleus mediates GLP-1 receptor agonist liraglutide-dependent weight loss

(2014) Anna Secher et al.   JOURNAL OF CLINICAL INVESTIGATION

Fast parallel image registration on CPU and GPU for diagnostic classification of Alzheimer's disease

(2014) Denis Shamonin   Frontiers in Neuroinformatics

Structural and molecular interrogation of intact biological systems

(2013) Kwanghun Chung et al.   NATURE

Three-dimensional imaging of solvent-cleared organs using 3DISCO

(2012) Ali Ertürk et al.   Nature Protocols

elastix: A Toolbox for Intensity-Based Medical Image Registration

(2009) S. Klein et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING