Cetaceans evolution: insights from the genome sequences of common minke whales

Minke whale genome and aquatic adaptation in cetaceans

(2013) Hyung-Soon Yim et al.   NATURE GENETICS

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

(2012) Y. Peng et al.   BIOINFORMATICS

The Cell Cycle Regulator Protein 14-3-3σ Is Essential for Hair Follicle Integrity and Epidermal Homeostasis

(2012) Nigel L. Hammond et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Dorsomedial hypothalamic NPY and energy balance control

(2012) Sheng Bi et al.   NEUROPEPTIDES

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2012) Ruibang Luo et al.   GigaScience

Adaptive seeds tame genomic sequence comparison

(2011) S. M. Kielbasa et al.   GENOME RESEARCH

The Origin(s) of Whales

(2010) Mark D. Uhen   Annual Review of Earth and Planetary Sciences

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

(2010) S. Gnerre et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The sequence and de novo assembly of the giant panda genome

(2009) Ruiqiang Li et al.   NATURE

Using native and syntenically mapped cDNA alignments to improve de novo gene finding

(2008) Mario Stanke et al.   BIOINFORMATICS

An approach of orthology detection from homologous sequences under minimum evolution

(2008) Kyung Mo Kim et al.   NUCLEIC ACIDS RESEARCH

Standard and generalized McDonald-Kreitman test: a website to detect selection by comparing different classes of DNA sites

(2008) R. Egea et al.   NUCLEIC ACIDS RESEARCH

Morphological and Molecular Evidence for a Stepwise Evolutionary Transition from Teeth to Baleen in Mysticete Whales

(2008) Thomas A. Deméré et al.   SYSTEMATIC BIOLOGY