Genome-wide identification and evolutionary analyses of bZIP transcription factors in wheat and its relatives and expression profiles of anther development related TabZIP genes

Genome-wide evolutionary characterization and analysis of bZIP transcription factors and their expression profiles in response to multiple abiotic stresses in Brachypodium distachyon

(2015) Xiang Liu et al.   BMC GENOMICS

GSDS 2.0: an upgraded gene feature visualization server

(2014) Bo Hu et al.   BIOINFORMATICS

Genome-wide analysis and expression profile of the bZIP transcription factor gene family in grapevine (Vitis vinifera)

(2014) Jinyi Liu et al.   BMC GENOMICS

ABI-like transcription factor gene TaABL1 from wheat improves multiple abiotic stress tolerances in transgenic plants

(2014) Dong-Bei Xu et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

A novel wheat bZIP transcription factor, TabZIP60, confers multiple abiotic stress tolerances in transgenicArabidopsis

(2014) Lina Zhang et al.   PHYSIOLOGIA PLANTARUM

mRNA and Small RNA Transcriptomes Reveal Insights into Dynamic Homoeolog Regulation of Allopolyploid Heterosis in Nascent Hexaploid Wheat

(2014) A. Li et al.   PLANT CELL

Genome-Wide Analysis of the bZIP Transcription Factors in Cucumber

(2014) Mehmet Cengiz Baloglu et al.   PLoS One

Ancient hybridizations among the ancestral genomes of bread wheat

(2014) T. Marcussen et al.   SCIENCE

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

(2014) et al.   SCIENCE

Genome interplay in the grain transcriptome of hexaploid bread wheat

(2014) M. Pfeifer et al.   SCIENCE

Structural and functional partitioning of bread wheat chromosome 3B

(2014) F. Choulet et al.   SCIENCE

GigaDB: promoting data dissemination and reproducibility

(2014) T. P. Sneddon et al.   Database-The Journal of Biological Databases and Curation

Draft genome of the wheat A-genome progenitor Triticum urartu

(2013) Hong-Qing Ling et al.   NATURE

Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation

(2013) Jizeng Jia et al.   NATURE

Gramene 2013: comparative plant genomics resources

(2013) Marcela K. Monaco et al.   NUCLEIC ACIDS RESEARCH

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Interlocking Feedback Loops Govern the Dynamic Behavior of the Floral Transition in Arabidopsis

(2013) K. E. Jaeger et al.   PLANT CELL

Regulation of FLOWERING LOCUS T by a MicroRNA in Brachypodium distachyon

(2013) L. Wu et al.   PLANT CELL

Genomic surveys and expression analysis of bZIP gene family in castor bean (Ricinus communis L.)

(2013) Zhengwei Jin et al.   PLANTA

A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor

(2013) M.-C. Luo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Optimizing de novo common wheat transcriptome assembly using short-read RNA-Seq data

(2012) Jialei Duan et al.   BMC GENOMICS

Transcriptome-scale homoeolog-specific transcript assemblies of bread wheat

(2012) Andreas W Schreiber et al.   BMC GENOMICS

Genome-Wide Analysis of bZIP-Encoding Genes in Maize

(2012) K. Wei et al.   DNA RESEARCH

Analysis of the bread wheat genome using whole-genome shotgun sequencing

(2012) Rachel Brenchley et al.   NATURE

Uncovering Small RNA-Mediated Responses to Cold Stress in a Wheat Thermosensitive Genic Male-Sterile Line by Deep Sequencing

(2012) Z. Tang et al.   PLANT PHYSIOLOGY

Isolation and Functional Analysis of the bZIP Transcription Factor Gene TaABP1 from a Chinese Wheat Landrace

(2012) Xin-you CAO et al.   Journal of Integrative Agriculture

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

Wide-scale screening of T-DNA lines for transcription factor genes affecting male gametophyte development in Arabidopsis

(2011) David Reňák et al.   SEXUAL PLANT REPRODUCTION

Genome-wide Expansion and Expression Divergence of the Basic Leucine Zipper Transcription Factors in Higher Plants with an Emphasis on SorghumF

(2010) Jizhou Wang et al.   Journal of Integrative Plant Biology

Genome sequencing and analysis of the model grass Brachypodium distachyon

(2010) John P. Vogel et al.   NATURE

Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling

(2010) Ignacio Medina et al.   NUCLEIC ACIDS RESEARCH

Cold stress contributes to aberrant cytokinesis during male meiosis I in a wheat thermosensitive genic male sterile line

(2010) ZONGHUI TANG et al.   PLANT CELL AND ENVIRONMENT

Arabidopsis Basic Leucine-Zipper Transcription Factors TGA9 and TGA10 Interact with Floral Glutaredoxins ROXY1 and ROXY2 and Are Redundantly Required for Anther Development

(2010) J. Murmu et al.   PLANT PHYSIOLOGY

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana

(2009) Leonardo Alves-Junior et al.   NUCLEIC ACIDS RESEARCH

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

AtbZIP34 is required for Arabidopsis pollen wall patterning and the control of several metabolic pathways in developing pollen

(2009) Antónia Gibalová et al.   PLANT MOLECULAR BIOLOGY

Development of abiotic stress tolerance via bZIP-type transcription factor LIP19 in common wheat

(2008) Fuminori Kobayashi et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Genome-Wide Transcription Analysis Reveals a Close Correlation of Promoter INDEL Polymorphism and Heterotic Gene Expression in Rice Hybrids

(2008) Hui-Yong Zhang et al.   Molecular Plant

Positive role of a wheatHvABI5ortholog in abiotic stress response of seedlings

(2008) Fuminori Kobayashi et al.   PHYSIOLOGIA PLANTARUM

A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance

(2008) Meijuan Zou et al.   PLANT MOLECULAR BIOLOGY

Global Identification of DELLA Target Genes during Arabidopsis Flower Development

(2008) X. Hou et al.   PLANT PHYSIOLOGY

Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis

(2008) Yong Liao et al.   PLANTA