Generation of whole genome sequences of new Cryptosporidium hominis and Cryptosporidium parvum isolates directly from stool samples

Isolation and Enrichment of Cryptosporidium DNA and Verification of DNA Purity for Whole-Genome Sequencing

(2014) Yaqiong Guo et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Effects of bovine colostrum supplementation on upper respiratory illness in active males

(2013) Arwel W. Jones et al.   BRAIN BEHAVIOR AND IMMUNITY

Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture

(2013) H. M. B. Seth-Smith et al.   GENOME RESEARCH

Burden and aetiology of diarrhoeal disease in infants and young children in developing countries (the Global Enteric Multicenter Study, GEMS): a prospective, case-control study

(2013) Karen L Kotloff et al.   LANCET

Comparative genome analysis of two Cryptosporidium parvum isolates with different host range

(2012) Giovanni Widmer et al.   INFECTION GENETICS AND EVOLUTION

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs

(2012) Martin T Swain et al.   Nature Protocols

The epidemiology of sporadic human infections with unusual cryptosporidia detected during routine typing in England and Wales, 2000–2008

(2011) K. ELWIN et al.   EPIDEMIOLOGY AND INFECTION

RATT: Rapid Annotation Transfer Tool

(2011) Thomas D. Otto et al.   NUCLEIC ACIDS RESEARCH

Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology

(2010) Thomas D. Otto et al.   BIOINFORMATICS

Multi-locus analysis of human infective Cryptosporidium species and subtypes using ten novel genetic loci

(2010) Maha Bouzid et al.   BMC MICROBIOLOGY

Re-description of Cryptosporidium cuniculus Inman and Takeuchi, 1979 (Apicomplexa: Cryptosporidiidae): Morphology, biology and phylogeny

(2010) Guy Robinson et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Detection and Differentiation of Cryptosporidium spp. in Human Clinical Samples by Use of Real-Time PCR

(2010) S. J. Hadfield et al.   JOURNAL OF CLINICAL MICROBIOLOGY

The CpA135 gene as a marker to identify Cryptosporidium species infecting humans

(2010) Fabio Tosini et al.   PARASITOLOGY INTERNATIONAL

Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps

(2010) Isheng J Tsai et al.   GENOME BIOLOGY

ABACAS: algorithm-based automatic contiguation of assembled sequences

(2009) S. Assefa et al.   BIOINFORMATICS

Minireview: Clinical cryptosporidiosis

(2009) Rachel M. Chalmers et al.   EXPERIMENTAL PARASITOLOGY

Whole genome amplification (WGA) for archiving and genotyping of clinical isolates of Cryptosporidium species

(2009) MAHA BOUZID et al.   PARASITOLOGY