Metabolomic and transcriptomic insights into how cotton fiber transitions to secondary wall synthesis, represses lignification, and prolongs elongation

A survey of plant and algal genomes and transcriptomes reveals new insights into the evolution and function of the cellulose synthase superfamily

(2014) Yanbin Yin et al.   BMC GENOMICS

Cotton KNL1, encoding a class II KNOX transcription factor, is involved in regulation of fibre development

(2014) Si-Ying Gong et al.   JOURNAL OF EXPERIMENTAL BOTANY

Homogalacturonan-modifying enzymes: structure, expression, and roles in plants

(2014) Fabien Sénéchal et al.   JOURNAL OF EXPERIMENTAL BOTANY

Exogenous γ-aminobutyric acid (GABA) affects pollen tube growth via modulating putative Ca2+-permeable membrane channels and is coupled to negative regulation on glutamate decarboxylase

(2014) Guang-Hui Yu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Cotton proteomics for deciphering the mechanism of environment stress response and fiber development

(2014) Meiliang Zhou et al.   Journal of Proteomics

Changes in metabolite profiles in Norway spruce shoot tips during short-day induced winter bud development and long-day induced bud flush

(2014) Yeon Kyeong Lee et al.   Metabolomics

Vegetative and Sperm Cell-Specific Aquaporins of Arabidopsis Highlight the Vacuolar Equipment of Pollen and Contribute to Plant Reproduction

(2014) M. M. Wudick et al.   PLANT PHYSIOLOGY

Proteomics profiling of fiber development and domestication in upland cotton (Gossypium hirsutum L.)

(2014) Guanjing Hu et al.   PLANTA

Understanding the Relationship between Cotton Fiber Properties and Non-Cellulosic Cell Wall Polysaccharides

(2014) Dhivyaa Rajasundaram et al.   PLoS One

Cell wall methanol as a signal in plant immunity

(2014) Tatiana V. Komarova et al.   Frontiers in Plant Science

Functional analyses of cotton (Gossypium hirsutum L.) immature fiber (im) mutant infer that fiber cell wall development is associated with stress responses

(2013) Hee Kim et al.   BMC GENOMICS

Rice SLENDER LEAF 1 gene encodes cellulose synthase-like D4 and is specifically expressed in M-phase cells to regulate cell proliferation

(2013) Takanori Yoshikawa et al.   JOURNAL OF EXPERIMENTAL BOTANY

Glutamate signalling in roots

(2013) Brian G. Forde   JOURNAL OF EXPERIMENTAL BOTANY

Gradual transition zone between cell wall layers and its influence on wood elastic modulus

(2013) Ningling Wang et al.   JOURNAL OF MATERIALS SCIENCE

Proteomic profiling of developing cotton fibers from wild and domesticatedGossypium barbadense

(2013) Guanjing Hu et al.   NEW PHYTOLOGIST

Physiological aspects of raffinose family oligosaccharides in plants: protection against abiotic stress

(2013) A. I. ElSayed et al.   PLANT BIOLOGY

The Dual Functions of WLIM1a in Cell Elongation and Secondary Wall Formation in Developing Cotton Fibers

(2013) L.-B. Han et al.   PLANT CELL

Cellulose Biosynthesis: Counting the Chains

(2013) M. C. Jarvis   PLANT PHYSIOLOGY

A Genetic and Metabolic Analysis Revealed that Cotton Fiber Cell Development Was Retarded by Flavonoid Naringenin

(2013) J. Tan et al.   PLANT PHYSIOLOGY

Cotton Fiber Cell Walls of Gossypium hirsutum and Gossypium barbadense Have Differences Related to Loosely-Bound Xyloglucan

(2013) Utku Avci et al.   PLoS One

Pectin Methylesterase and Pectin Remodelling Differ in the Fibre Walls of Two Gossypium Species with Very Different Fibre Properties

(2013) Qinxiang Liu et al.   PLoS One

Navigating the transcriptional roadmap regulating plant secondary cell wall deposition

(2013) Steven G. Hussey et al.   Frontiers in Plant Science

Identification of novel transcription factors regulating secondary cell wall formation in Arabidopsis

(2013) Hua Cassan-Wang et al.   Frontiers in Plant Science

Dihydromyricetin As a Novel Anti-Alcohol Intoxication Medication

(2012) Y. Shen et al.   JOURNAL OF NEUROSCIENCE

Metabolomic Profiling in Selaginella lepidophylla at Various Hydration States Provides New Insights into the Mechanistic Basis of Desiccation Tolerance

(2012) Abou Yobi et al.   Molecular Plant

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres

(2012) Andrew H. Paterson et al.   NATURE

Assessing the monophyly of polyploid Gossypium species

(2012) C. E. Grover et al.   PLANT SYSTEMATICS AND EVOLUTION

Molecular Mechanisms of Fiber Differential Development between G. barbadense and G. hirsutum Revealed by Genetical Genomics

(2012) Xiangdong Chen et al.   PLoS One

Deep Sequencing Reveals Differences in the Transcriptional Landscapes of Fibers from Two Cultivated Species of Cotton

(2012) Jean-Marc Lacape et al.   PLoS One

The Pectin Lyases in Arabidopsis thaliana: Evolution, Selection and Expression Profiles

(2012) Jun Cao   PLoS One

Lipids of plant membrane rafts

(2012) Jean-Luc Cacas et al.   PROGRESS IN LIPID RESEARCH

Plant proteins under oxidative attack

(2012) Silke Jacques et al.   PROTEOMICS

Cotton fiber: a powerful single-cell model for cell wall and cellulose research

(2012) Candace H. Haigler et al.   Frontiers in Plant Science

VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R

(2011) Hanbo Chen et al.   BMC BIOINFORMATICS

Elevated Growing Degree Days Influence Transition Stage Timing During Cotton Fiber Development Resulting in Increased Fiber-Bundle Strength

(2011) Doug J. Hinchliffe et al.   CROP SCIENCE

Comparative analysis of Gossypium and Vitis genomes indicates genome duplication specific to the Gossypium lineage

(2011) Lifeng Lin et al.   GENOMICS

A role for CSLD3 during cell-wall synthesis in apical plasma membranes of tip-growing root-hair cells

(2011) Sungjin Park et al.   NATURE CELL BIOLOGY

Serotonin, a Tryptophan-Derived Signal Conserved in Plants and Animals, Regulates Root System Architecture Probably Acting as a Natural Auxin Inhibitor in Arabidopsis thaliana

(2011) Ramón Pelagio-Flores et al.   PLANT AND CELL PHYSIOLOGY

A Sister Group Contrast Using Untargeted Global Metabolomic Analysis Delineates the Biochemical Regulation Underlying Desiccation Tolerance inSporobolus stapfianus

(2011) Melvin J. Oliver et al.   PLANT CELL

Constitutively expressed DHAR and MDHAR influence fruit, but not foliar ascorbate levels in tomato

(2011) Victor M. Haroldsen et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Transcriptional networks for lignin biosynthesis: more complex than we thought?

(2011) Qiao Zhao et al.   TRENDS IN PLANT SCIENCE

Hemicelluloses

(2010) Henrik Vibe Scheller et al.   Annual Review of Plant Biology

Gene expression in developing fibres of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication

(2010) Ryan A Rapp et al.   BMC BIOLOGY

Identification of the family of aquaporin genes and their expression in upland cotton (Gossypium hirsutum L.)

(2010) Wonkeun Park et al.   BMC PLANT BIOLOGY

Phylogenetically Distinct Cellulose Synthase Genes Support Secondary Wall Thickening in Arabidopsis Shoot Trichomes and Cotton Fiber

(2010) Lissete Betancur et al.   Journal of Integrative Plant Biology

Evolutionary conservation of the transcriptional network regulating secondary cell wall biosynthesis

(2010) Ruiqin Zhong et al.   TRENDS IN PLANT SCIENCE

Organization of GC/MS and LC/MS metabolomics data into chemical libraries

(2010) Corey D DeHaven et al.   Journal of Cheminformatics

Integrated, Nontargeted Ultrahigh Performance Liquid Chromatography/Electrospray Ionization Tandem Mass Spectrometry Platform for the Identification and Relative Quantification of the Small-Molecule Complement of Biological Systems

(2009) Anne M. Evans et al.   ANALYTICAL CHEMISTRY

Cotton GhPOX1 encoding plant class III peroxidase may be responsible for the high level of reactive oxygen species production that is related to cotton fiber elongation

(2009) Wenqian Mei et al.   Journal of Genetics and Genomics

Molecular and Biochemical Evidence for Phenylpropanoid Synthesis and Presence of Wall-linked Phenolics in Cotton Fibers

(2009) Ling Fan et al.   Journal of Integrative Plant Biology

Effect of H2O2 on fiber initiation using fiber retardation initiation mutants in cotton (Gossypium hirsutum)

(2009) Dayong Zhang et al.   JOURNAL OF PLANT PHYSIOLOGY

Alternative oxidase: a target and regulator of stress responses

(2009) Olivier Van Aken et al.   PHYSIOLOGIA PLANTARUM

Transcript Profiling During Fiber Development Identifies Pathways in Secondary Metabolism and Cell Wall Structure That May Contribute to Cotton Fiber Quality

(2009) Yves Al-Ghazi et al.   PLANT AND CELL PHYSIOLOGY

The essential role of GhPEL gene, encoding a pectate lyase, in cell wall loosening by depolymerization of the de-esterified pectin during fiber elongation in cotton

(2009) Haihai Wang et al.   PLANT MOLECULAR BIOLOGY

A Specialized Outer Layer of the Primary Cell Wall Joins Elongating Cotton Fibers into Tissue-Like Bundles

(2009) B. Singh et al.   PLANT PHYSIOLOGY

Overexpression of dehydroascorbate reductase, but not monodehydroascorbate reductase, confers tolerance to aluminum stress in transgenic tobacco

(2009) Lina Yin et al.   PLANTA

Global analysis of gene expression in cotton fibers from wild and domesticatedGossypium barbadense

(2008) Bhupendra Chaudhary et al.   EVOLUTION & DEVELOPMENT

AtTIP1;3andAtTIP5;1, the only highly expressed Arabidopsis pollen-specific aquaporins, transport water and urea

(2008) Gabriela Soto et al.   FEBS LETTERS

The integration of glutathione homeostasis and redox signaling

(2008) Andreas J. Meyer   JOURNAL OF PLANT PHYSIOLOGY

Comparative Proteomic Analysis Provides New Insights into the Fiber Elongating Process in Cotton

(2008) Yi-Wei Yang et al.   JOURNAL OF PROTEOME RESEARCH

Analysis of the adult human plasma metabolome

(2008) Kay A Lawton et al.   PHARMACOGENOMICS

Oxylipin Signaling in Plant Stress Responses

(2008) N. A. Eckardt   PLANT CELL

Galactinol and Raffinose Constitute a Novel Function to Protect Plants from Oxidative Damage

(2008) A. Nishizawa et al.   PLANT PHYSIOLOGY

The Evolution of Spinnable Cotton Fiber Entailed Prolonged Development and a Novel Metabolism

(2008) Ran Hovav et al.   PLoS Genetics

Local Positive Feedback Regulation Determines Cell Shape in Root Hair Cells

(2008) S. Takeda et al.   SCIENCE