4.7 Article

pSIN: A scalable, Parallel algorithm for Seismic INterferometry of large-N ambient-noise data

Journal

COMPUTERS & GEOSCIENCES
Volume 93, Issue -, Pages 88-95

Publisher

PERGAMON-ELSEVIER SCIENCE LTD
DOI: 10.1016/j.cageo.2016.05.003

Keywords

Seismic interferometry; Ambient-noise; Parallel algorithm; Message-passing interface

Funding

  1. National Science Foundation, USA [EAR-1331939]

Ask authors/readers for more resources

Seismic interferometry is a technique for extracting deterministic signals (i.e., ambient-noise Green's functions) from recordings of ambient-noise wavefields through cross-correlation and other related signal processing techniques. The extracted ambient-noise Green's functions can be used in ambient noise tomography for constructing seismic structure models of the Earth's interior. The amount of calculations involved in the seismic interferometry procedure can be significant, especially for ambient noise datasets collected by large seismic sensor arrays (i.e., large-N data). We present an efficient parallel algorithm, named pSIN (Parallel Seismic INterferometry), for solving seismic interferometry problems on conventional distributed-memory computer clusters. The design of the algorithm is based on a two-dimensional partition of the ambient-noise data recorded by a seismic sensor array. We pay special attention to the balance of the computational load, inter-process communication overhead and memory usage across all MPI processes and we minimize the total number of I/O operations. We have tested the algorithm using a real ambient-noise dataset and obtained a significant amount of savings in processing time. Scaling tests have shown excellent strong scalability from 80 cores to over 2000 cores. (C) 2016 Elsevier Ltd. All rights reserved.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Geochemistry & Geophysics

Ambient Rayleigh wave field imaging of the critical zone in a weathered granite terrane

Ian Keifer, Ken Dueker, Po Chen

EARTH AND PLANETARY SCIENCE LETTERS (2019)

Article Geosciences, Multidisciplinary

Resolving Deep Critical Zone Architecture in Complex Volcanic Terrain

Bryan G. Moravec, Alissa M. White, Robert A. Root, Andres Sanchez, Yaniv Olshansky, Ben K. Paras, Bradley Carr, Jennifer McIntosh, Jon D. Pelletier, Craig Rasmussen, W. Steven Holbrook, Jon Chorover

JOURNAL OF GEOPHYSICAL RESEARCH-EARTH SURFACE (2020)

Article Geochemistry & Geophysics

Crustal Structure of the Greenland-Iceland Ridge from Joint Refraction and Reflection Seismic Tomography

Xiaoyu Yuan, Jun Korenaga, W. Steven Holbrook, Peter B. Kelemen

JOURNAL OF GEOPHYSICAL RESEARCH-SOLID EARTH (2020)

Article Geography, Physical

Strong slope-aspect control of regolith thickness by bedrock foliation

Jordan D. Leone, W. Steven Holbrook, Clifford S. Riebe, Jon Chorover, Ty P. A. Ferre, Bradley J. Carr, Russell P. Callahan

EARTH SURFACE PROCESSES AND LANDFORMS (2020)

Article Geosciences, Multidisciplinary

Subsurface Weathering Revealed in Hillslope-Integrated Porosity Distributions

Russell P. Callahan, Clifford S. Riebe, Sylvain Pasquet, Ken L. Ferrier, Dario Grana, Leonard S. Sklar, Nicholas J. Taylor, Brady A. Flinchum, Jorden L. Hayes, Bradley J. Carr, Peter C. Hartsough, Anthony T. O'Geen, W. Steven Holbrook

GEOPHYSICAL RESEARCH LETTERS (2020)

Article Geochemistry & Geophysics

Limited Mantle Hydration by Bending Faults at the Middle America Trench

Nathaniel C. Miller, Daniel Lizarralde, John A. Collins, W. Steven Holbrook, Harm J. A. Van Avendonk

Summary: Seismic anisotropy measurements indicate that upper mantle hydration is limited to serpentinization and/or fault zones, not distributed uniformly, impacting important processes at the Middle America Trench; outer rise plate-bending faults may provide a pathway for seawater to rehydrate the slab mantle; hydration confined to fault zones reduces water storage estimates for the MAT upper mantle.

JOURNAL OF GEOPHYSICAL RESEARCH-SOLID EARTH (2021)

Article Geosciences, Multidisciplinary

Quantifying Depth-Dependent Seismic Anisotropy in the Critical Zone Enhanced by Weathering of a Piedmont Schist

B. J. Eppinger, J. L. Hayes, B. J. Carr, S. Moon, C. L. Cosans, W. S. Holbrook, C. J. Harman, Z. T. Plante

Summary: Weathering processes can weaken and break apart rock, releasing nutrients and increasing the permeability of subsurface materials. By quantifying seismic anisotropy in weathered materials at different depths, researchers can better understand the effects of weathering on rock fabric and its implications for hydrology, geomorphology, and landscape evolution. The findings suggest a correlation between in situ weathering and anisotropy, indicating that weathering may amplify the intrinsic anisotropy of bedrock.

JOURNAL OF GEOPHYSICAL RESEARCH-EARTH SURFACE (2021)

Article Geosciences, Multidisciplinary

Forest vulnerability to drought controlled by bedrock composition

Russell P. Callahan, Clifford S. Riebe, Leonard S. Sklar, Sylvain Pasquet, Ken L. Ferrier, W. Jesse Hahms, Nicholas J. Taylor, Dario Grana, Brady A. Flinchum, Jorden L. Hayes, W. Steven Holbrook

Summary: The spatial variability in forest drought response during the severe drought in California between 2011 and 2017 can be explained by differences in bedrock composition. Forests rooted in weathered, nutrient-rich bedrock are more vulnerable to drought, while forests on relatively unweathered, nutrient-poor bedrock are less affected.

NATURE GEOSCIENCE (2022)

Article Water Resources

What Do P-Wave Velocities Tell Us About the Critical Zone?

Brady A. Flinchum, W. Steven Holbrook, Bradley J. Carr

Summary: Fractures in Earth's critical zone affect groundwater flow, storage, and chemical weathering. Seismic velocities in the fractured bedrock layer of the critical zone are scale-dependent, with smaller-scale velocities showing significant heterogeneity in fracture density and larger-scale velocities being slower and lacking lateral heterogeneity. The discrepancy is a result of the contrasting measurement scales between the two methods, providing information on the fractured medium at vastly different scales.

FRONTIERS IN WATER (2022)

Article Water Resources

The Effect of Aspect and Elevation on Critical Zone Architecture in the Reynolds Creek Critical Zone Observatory: A Seismic Refraction Study

Travis Nielson, John Bradford, W. Steven Holbrook, Mark Seyfried

Summary: In snow-dominated mountainous watersheds in the northern hemisphere, north-facing slopes tend to be more deeply weathered than south-facing slopes due to the more persistent snowpack. A study conducted in Johnston Draw revealed that differences in snow accumulation can lead to variations in weathering depth, with the largest difference occurring where snow accumulation is greatest.

FRONTIERS IN WATER (2021)

Article Geochemistry & Geophysics

Seismic evidence of glacial deposits inhibiting weathering of local bedrock at a snow-dominated subalpine watershed

Wei Wang, Po Chen, Ken Dueker, En-Jui Lee, Dawei Mu, Ian Keifer

EARTH AND PLANETARY SCIENCE LETTERS (2020)

Article Environmental Sciences

Characterizing the Critical Zone Using Borehole and Surface Nuclear Magnetic Resonance

Brady A. Flinchum, W. Steven Holbrook, Andrew D. Parsekian, Bradley J. Carr

VADOSE ZONE JOURNAL (2019)

Article Ecology

Spatiotemporal Heterogeneity of Water Flowpaths Controls Dissolved Organic Carbon Sourcing in a Snow-Dominated, Headwater Catchment

Anna G. Radke, Sarah E. Godsey, Kathleen A. Lohse, Emma P. McCorkle, Julia Perdrial, Mark S. Seyfried, W. Steven Holbrook

FRONTIERS IN ECOLOGY AND EVOLUTION (2019)

Article Computer Science, Interdisciplinary Applications

An advanced median filter for improving the signal-to-noise ratio of seismological datasets

Yapo Abole Serge Innocent Oboue, Yunfeng Chen, Sergey Fomel, Wei Zhong, Yangkang Chen

Summary: Strong noise can disrupt the recorded seismic waves and negatively impact subsequent seismological processes. To improve the signal-to-noise ratio (S/N) of seismological data, we introduce MATamf, an open-source MATLAB code package based on an advanced median filter (AMF) that simultaneously attenuates various types of noise and improves S/N. Experimental results demonstrate the usefulness and advantages of the proposed AMF workflow in enhancing the S/N of a wide range of seismological applications.

COMPUTERS & GEOSCIENCES (2024)

Article Computer Science, Interdisciplinary Applications

Advection-based tracking and analysis of salinity movement in the Indian Ocean

Upkar Singh, P. N. Vinayachandran, Vijay Natarajan

Summary: The Bay of Bengal maintains its salinity distribution due to the cyclic flow of high salinity water and the mixing with freshwater. This paper introduces an advection-based feature definition and algorithms to track the movement of high salinity water, validated through comparison with observed data.

COMPUTERS & GEOSCIENCES (2024)

Article Computer Science, Interdisciplinary Applications

Automated mapping of bedrock-fracture traces from UAV-acquired images using U-Net convolutional neural networks

Bijal Chudasama, Nikolas Ovaskainen, Jonne Tamminen, Nicklas Nordback, Jon Engstro, Ismo Aaltonen

Summary: This contribution presents a novel U-Net convolutional neural network (CNN)-based workflow for automated mapping of bedrock fracture traces from aerial photographs acquired by unmanned aerial vehicles (UAV). The workflow includes training a U-Net CNN using a small subset of photographs with manually traced fractures, semantic segmentation of input images, pixel-wise identification of fracture traces, ridge detection algorithm and vectorization. The results show the effectiveness and accuracy of the workflow in automated mapping of bedrock fracture traces.

COMPUTERS & GEOSCIENCES (2024)

Article Computer Science, Interdisciplinary Applications

A novel finer soil strength mapping framework based on machine learning and remote sensing images

Ruizhen Wang, Siyang Wan, Weitao Chen, Xuwen Qin, Guo Zhang, Lizhe Wang

Summary: This paper proposes a novel framework to generate a finer soil strength map based on RCI, which uses ensemble learning models to obtain USCS soil classification and predict soil moisture, in order to improve the resolution and reliability of existing soil strength maps.

COMPUTERS & GEOSCIENCES (2024)

Article Computer Science, Interdisciplinary Applications

Intelligent terrain generation considering global information and terrain patterns

Zhanlong Chen, Xiaochuan Ma, Houpu Li, Xuwei Xu, Xiaoyi Han

Summary: Simulated terrains are important for landform and terrain research, disaster prediction, rescue and disaster relief, and national security. This study proposes a deep learning method, IGPN, that integrates global information and pattern features of the local terrain to generate accurate simulated terrains quickly.

COMPUTERS & GEOSCIENCES (2024)

Article Computer Science, Interdisciplinary Applications

Physics-Informed Neural Networks for solving transient unconfined groundwater flow

Daniele Secci, Vanessa A. Godoy, J. Jaime Gomez-Hernandez

Summary: Neural networks excel in various machine learning applications, but lack physical interpretability and constraints, limiting their accuracy and reliability in predicting complex physical systems' behavior. Physics-Informed Neural Networks (PINNs) integrate neural networks with physical laws, providing an effective tool for solving physical problems. This article explores recent developments in PINNs, emphasizing their application in solving unconfined groundwater flow, and discusses challenges and opportunities in this field.

COMPUTERS & GEOSCIENCES (2024)

Article Computer Science, Interdisciplinary Applications

A physically constrained hybrid deep learning model to mine a geochemical data cube in support of mineral exploration

Renguang Zuo, Ying Xu

Summary: This study proposes a hybrid deep learning model consisting of a one-dimensional convolutional neural network (1DCNN) and a graph convolutional network (GCN) to extract joint spectrum-spatial features from geochemical survey data for mineral exploration. The physically constrained hybrid model performs better in geochemical anomaly recognition compared to other models.

COMPUTERS & GEOSCIENCES (2024)