Second generation physical and linkage maps of yellowtail (Seriola quinqueradiata) and comparison of synteny with four model fish

Construction of a radiation hybrid panel and the first yellowtail (Seriola quinqueradiata) radiation hybrid map using a nanofluidic dynamic array

(2014) Jun-ya Aoki et al.   BMC GENOMICS

De Novo Characterization of the Spleen Transcriptome of the Large Yellow Croaker (Pseudosciaena crocea) and Analysis of the Immune Relevant Genes and Pathways Involved in the Antiviral Response

(2014) Yinnan Mu et al.   PLoS One

Rapid, economical single-nucleotide polymorphism and microsatellite discovery based onde novoassembly of a reduced representation genome in a non-model organism: a case study of Atlantic codGadus morhua

(2013) J. Carlsson et al.   JOURNAL OF FISH BIOLOGY

A Dense Genetic Linkage Map for Common Carp and Its Integration with a BAC-Based Physical Map

(2013) Lan Zhao et al.   PLoS One

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote

(2012) Shikai Liu et al.   BMC GENOMICS

Single nucleotide polymorphism discovery in cutthroat trout subspecies using genome reduction, barcoding, and 454 pyro-sequencing

(2012) Derek D Houston et al.   BMC GENOMICS

A high-resolution map of the Nile tilapia genome: a resource for studying cichlids and other percomorphs

(2012) Richard Guyon et al.   BMC GENOMICS

An Immune-Related Gene Evolved into the Master Sex-Determining Gene in Rainbow Trout, Oncorhynchus mykiss

(2012) Ayaka Yano et al.   CURRENT BIOLOGY

Transcriptome Analysis of Silver Carp (Hypophthalmichthys molitrix) by Paired-End RNA Sequencing

(2012) B. Fu et al.   DNA RESEARCH

RNA-Seq Identifies SNP Markers for Growth Traits in Rainbow Trout

(2012) Mohamed Salem et al.   PLoS One

High-Throughput Sequence Analysis of Turbot (Scophthalmus maximus) Transcriptome Using 454-Pyrosequencing for the Discovery of Antiviral Immune Genes

(2012) Patricia Pereiro et al.   PLoS One

Improved Minimum Cost and Maximum Power Two Stage Genome-Wide Association Study Designs

(2012) Stephen A. Stanhope et al.   PLoS One

SNP Discovery Using Next Generation Transcriptomic Sequencing in Atlantic Herring (Clupea harengus)

(2012) Sarah J. Helyar et al.   PLoS One

Genome-Wide SNP Discovery from Transcriptome of Four Common Carp Strains

(2012) Jian Xu et al.   PLoS One

A Y-linked anti-Mullerian hormone duplication takes over a critical role in sex determination

(2012) R. S. Hattori et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Second-Generation Genetic Linkage Map of Catfish and Its Integration with the BAC-Based Physical Map

(2012) Parichart Ninwichian et al.   G3-Genes Genomes Genetics

Generation of genome-scale gene-associated SNPs in catfish for the construction of a high-density SNP array

(2011) Shikai Liu et al.   BMC GENOMICS

A high-resolution linkage map for comparative genome analysis and QTL fine mapping in Asian seabass, Lates calcarifer

(2011) Chun Ming Wang et al.   BMC GENOMICS

A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns

(2011) Sigbjørn Lien et al.   BMC GENOMICS

Integration of the Genetic Map and Genome Assembly of Fugu Facilitates Insights into Distinct Features of Genome Evolution in Teleosts and Mammals

(2011) Wataru Kai et al.   Genome Biology and Evolution

Identification of the sex-linked locus in yellowtail, Seriola quinqueradiata

(2010) Kanako Fuji et al.   AQUACULTURE

Sequencing, de novo annotation and analysis of the first Anguilla anguilla transcriptome: EeelBase opens new perspectives for the study of the critically endangered european eel

(2010) Alessandro Coppe et al.   BMC GENOMICS

Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches

(2010) Mohamed Salem et al.   BMC GENOMICS

Development of a SNP resource and a genetic linkage map for Atlantic cod (Gadus morhua)

(2010) Sophie Hubert et al.   BMC GENOMICS

A radiation hybrid map of the European sea bass (Dicentrarchus labrax) based on 1581 markers: Synteny analysis with model fish genomes

(2010) Richard Guyon et al.   GENOMICS

Mining transcriptome sequences towards identifying adaptive single nucleotide polymorphisms in lake whitefish species pairs (Coregonusspp. Salmonidae)

(2010) SÉBASTIEN RENAUT et al.   MOLECULAR ECOLOGY

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

(2010) S. Gnerre et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies

(2010) Shaolin Wang et al.   GENOME BIOLOGY

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH

A second generation genetic map for rainbow trout (Oncorhynchus mykiss)

(2008) Caird E Rexroad et al.   BMC GENETICS

Quality scores and SNP detection in sequencing-by-synthesis systems

(2008) W. Brockman et al.   GENOME RESEARCH

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

High Throughput Gene Expression Measurement with Real Time PCR in a Microfluidic Dynamic Array

(2008) Sandra L. Spurgeon et al.   PLoS One