Ori-Finder 3: a web server for genome-wide prediction of replication origins in Saccharomyces cerevisiae

sefOri: selecting the best-engineered sequence features to predict DNA replication origins

(2019) Chenwei Lou et al.   BIOINFORMATICS

Comprehensive Analysis of Replication Origins in Saccharomyces cerevisiae Genomes

(2019) Dan Wang et al.   Frontiers in Microbiology

iRO-3wPseKNC: identify DNA replication origins by three-window-based PseKNC

(2018) Bin Liu et al.   BIOINFORMATICS

Recent development of Ori-Finder system and DoriC database for microbial replication origins

(2018) Hao Luo et al.   BRIEFINGS IN BIOINFORMATICS

Structure of the origin recognition complex bound to DNA replication origin

(2018) Ningning Li et al.   NATURE

Identify origin of replication in Saccharomyces cerevisiae using two-step feature selection technique

(2018) Fu-Ying Dao et al.   BIOINFORMATICS

Chromosome Duplication in Saccharomyces cerevisiae

(2016) S. P. Bell et al.   GENETICS

iORI-PseKNC: A predictor for identifying origin of replication with pseudo k-tuple nucleotide composition

(2015) Wen-Chao Li et al.   CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS

Specific binding of eukaryotic ORC to DNA replication origins depends on highly conserved basic residues

(2015) Hironori Kawakami et al.   Scientific Reports

Recent advances in the genome-wide study of DNA replication origins in yeast

(2015) Chong Peng et al.   Frontiers in Microbiology

A Brief Review: The Z-curve Theory and its Application in Genome Analysis

(2014) Ren Zhang et al.   CURRENT GENOMICS

Initiation of DNA Replication from Non-Canonical Sites on an Origin-Depleted Chromosome

(2014) Naomi L. Bogenschutz et al.   PLoS One

DeOri: a database of eukaryotic DNA replication origins

(2012) F. Gao et al.   BIOINFORMATICS

High-resolution mapping, characterization, and optimization of autonomously replicating sequences in yeast

(2012) I. Liachko et al.   GENOME RESEARCH

LIBSVM

(2012) Chih-Chung Chang et al.   ACM Transactions on Intelligent Systems and Technology

OriDB, the DNA replication origin database updated and extended

(2011) C. C. Siow et al.   NUCLEIC ACIDS RESEARCH

Saccharomyces Genome Database: the genomics resource of budding yeast

(2011) J. M. Cherry et al.   NUCLEIC ACIDS RESEARCH

Eukaryotic DNA replication origins: many choices for appropriate answers

(2010) Marcel Méchali   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Biopython: freely available Python tools for computational molecular biology and bioinformatics

(2009) P. J. A. Cock et al.   BIOINFORMATICS

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH