4.3 Article

Label-free molecular detection of antibiotic susceptibility forMycobacterium smegmatisusing a low cost electrode format

Journal

BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY
Volume 68, Issue 6, Pages 1159-1166

Publisher

WILEY
DOI: 10.1002/bab.2037

Keywords

antibiotic susceptibility; antimicrobial resistance; electrochemical biosensors; electrochemical impedance spectroscopy; square-wave voltammetry

Funding

  1. Turkish Scientific and Technological Council [217S793]
  2. British Council Institutional Links grant under the Newton-Katip Celebi Fund partnership [20180209]
  3. UK Department of Business, Energy and Industrial Strategy (BEIS)
  4. TUBITAK [217S793]

Ask authors/readers for more resources

The emergence of antibiotic resistance in pathogenic bacteria is a significant societal problem. Improved antibiotic stewardship requires better diagnostic testing, with in vitro antibiotic susceptibility testing becoming increasingly important. This research developed a method for testing antibiotic susceptibility in Mycobacterium smegmatis using streptomycin, showing potential for quicker and more economical determination of antibiotic susceptibility.
Today, the emergence of antibiotic resistance in pathogenic bacteria is considered an important problem for society. Excessive consumption of antibiotics, long-term treatments, and inappropriate prescriptions continually increase the severity of the problem. Improving antibiotic stewardship requires improved diagnostic testing, and, therefore,in vitroantibiotic susceptibility testing is becoming increasingly important. This research details the development of an antibiotic susceptibility test forMycobacterium smegmatisusing streptomycin as antibiotics. This strain was selected because it is a member of the slow growingMycobacteriumgenus and serves as a useful surrogate organism forM. tuberculosis. A commercially available and low-cost screen-printed gold electrode in combination with a specifically developed nucleic acid probe sequence for the 16SrRNA region of the mycobacterial genome was employed to monitorM. smegmatisnucleic acid sequences using the techniques of square-wave voltammetry and electrochemical impedance spectroscopy. The results show that it was possible to detectM. smegmatissequences and distinguish antibiotic-treated cells from untreated cells with a label-free molecular detection. As a result, thein vitroantibiotic susceptibility test revealed thatM. smegmatisshowed sensitivity to streptomycin after a 24-H incubation, with the developed protocol representing a potential approach to determining antibiotic susceptibility more quickly and economically than current methods.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.3
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Biochemical Research Methods

Accelerating the development of implantable neurochemical biosensors by using existing clinically applied depth electrodes

Alexander R. Macdonald, Francessca Charlton, Damion K. Corrigan

Summary: In this study, researchers functionalised an implantable stereo-electroencephalography (sEEG) depth electrode with an enzyme coating for enzyme-based biosensing of glucose and L-glutamate. Through characterisation using various electrochemical methods, they demonstrated that the modified electrode exhibited good electrochemical response and sensitivity to glucose and L-glutamate concentration, providing more accurate information for the treatment of neurological disorders. The findings suggest that existing clinical electrode devices can be adapted for combined electrochemical and electrophysiological measurements, accelerating the application of in vivo and wearable biosensing for diagnosis, treatment, and personalised medicine.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2023)

Article Biochemistry & Molecular Biology

Simple and low-cost antibiotic susceptibility testing for Mycobacterium tuberculosis using screen-printed electrodes

Hamed Ghorbanpoor, Iremnur Akcakoca, Araz Norouz Dizaji, Adrian Butterworth, Damion Corrigan, Tanil Kocagoz, Aliakbar Ebrahimi, Huseyin Avci, Fatma Dogan Guzel

Summary: It is estimated that one quarter of the global population is latently infected by Mycobacterium tuberculosis (TB), with 1 in 10 going on to develop active disease. Low-cost and easy-to-use technological solutions are critical for diagnosis and prescribing practice for TB in low- and middle-income countries. This study presents a low-cost and simple-to-use AST sensor that can detect drug susceptibility of M. tuberculosis in 96 hours.

BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY (2023)

Article Biophysics

A multifunctional sateen woven dressings for treatment of skin injuries

Ceren Ozel, Elif Apaydin, Ayla Eker Sariboyaci, Ali Tamayol, Huseyin Avci

Summary: In this study, a dressing made of composite fibers carrying mesenchymal stem cells (MSCs) and an antimicrobial agent was developed using a scalable sateen textile technique. The encapsulated MSCs in the dressing remained viable and maintained expression of wound repair factors for up to 28 days. The dressing showed enhanced healing properties with increased collagen synthesis and exhibited antimicrobial activity without negatively impacting the MSCs.

COLLOIDS AND SURFACES B-BIOINTERFACES (2023)

Article Biophysics

Revealing the single-channel characteristics of OprD (OccAB1) porins from hospital strains of Acinetobacter baumannii

Aliakbar Ebrahimi, Tugce Ergun, Ozge Kaygusuz Izgordu, Cihan Darcan, Huseyin Avci, Barcin Ozturk, Hatice Rahmet Guner, Hamed Ghorbanpoor, Fatma Dogan Guzel

Summary: Currently, there is an increase in reports of antimicrobial resistance (AMR) against antibiotics due to misapplication. This study investigates the possible mutations in OprD porins from A. baumannii strains isolated from patients infected with the bacteria, and compares them with the standard OprD isolated from wild type ATCC 19,606.

EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS (2023)

Article Chemistry, Multidisciplinary

Signal Amplification in Electrochemical DNA Biosensors Using Target-Capturing DNA Origami Tiles

Paul Williamson, Petteri Piskunen, Heini Ijas, Adrian Butterworth, Veikko Linko, Damion K. Corrigan

Summary: Electrochemical DNA (e-DNA) biosensors are effective tools for disease monitoring, as they can translate hybridization events into recordable electrical signals. In this study, a strategy for amplifying electrochemical signals associated with DNA hybridization was reported using DNA origami method, leading to an improved sensor limit of detection and high strand selectivity. This approach could address the sensitivity requirements for low-cost point-of-care devices.

ACS SENSORS (2023)

Article Biochemical Research Methods

High-throughput microfluidic chip with silica gel-C18 channels for cyclotide separation

Aliakbar Ebrahimi, Reza Didarian, Hamed Ghorbanpoor, Fatma Dogan Guzel, Hossein Hashempour, Huseyin Avci

Summary: This study used a microfluidic chip-based mimic of high-performance liquid chromatography (HPLC) strategy to successfully separate cyclotides. The results demonstrate that this method is a rapid, cost-effective, and simple way to separate cyclotides, with potential applications in drug discovery research.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2023)

Article Biochemical Research Methods

Comparing nanobody and aptamer-based capacitive sensing for detection of interleukin-6 (IL-6) at physiologically relevant levels

Raquel Sanchez-Salcedo, Rebeca Miranda-Castro, Noemi de-los-Santos-Alvarez, Maria Jesus Lobo-Castanon, Damion K. Corrigan

Summary: A capacitive electrochemical impedance spectroscopy sensing platform tailored for point-of-care detection and treatment monitoring has been developed. The specific recognition of IL-6 was achieved using an anti-IL-6 nanobody or a specific IL-6 aptamer. The results provide useful information for the future design of low-cost and wearable impedance biomarker detection platforms.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2023)

Article Biochemistry & Molecular Biology

Developing a Novel Platelet-Rich Plasma-Laden Bioadhesive Hydrogel Contact Lens for the Treatment of Ocular Surface Chemical Injuries

Merve Nur Soykan, Burcugul Altug, Harun Bas, Hamed Ghorbanpoor, Huseyin Avci, Sertac Eroglu, Sultan Butun Sengel, Ayla Eker Sariboyaci, Sibel Gunes Bagis, Onur Uysal, Eray Atalay

Summary: A PRP-laden GelMA hydrogel contact lens is developed to support and protect limbal stem cells after ocular surface injuries.

MACROMOLECULAR BIOSCIENCE (2023)

Article Multidisciplinary Sciences

Towards direct detection of tetracycline residues in milk with a gold nanostructured electrode

Magdalena R. R. Raykova, Katie McGuire, William J. J. Peveler, Damion K. K. Corrigan, Fiona L. L. Henriquez, Andrew C. C. Ward

Summary: Tetracycline antibiotics are widely used in veterinary medicine but are eliminated unmodified from animals through excretion routes. Residues secreted in milk are strictly controlled in dairy animals. In this study, an electrochemical detection method for tetracycline residues was developed using the metal chelation properties of tetracyclines. The method showed good sensitivity and specificity in detecting tetracycline in buffer media and milk samples with minimal sample preparation.

PLOS ONE (2023)

No Data Available