Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica

Transcriptional responses of the bacterial antagonistSerratia plymuthicato the fungal phytopathogenRhizoctonia solani

(2014) Saraswoti Neupane et al.   Environmental Microbiology Reports

The glyoxylate cycle is involved in pleotropic phenotypes, antagonism and induction of plant defence responses in the fungal biocontrol agent Trichoderma atroviride

(2013) Mukesh K. Dubey et al.   FUNGAL GENETICS AND BIOLOGY

Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4

(2013) Saraswoti Neupane et al.   Standards in Genomic Sciences

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Primer3—new capabilities and interfaces

(2012) Andreas Untergasser et al.   NUCLEIC ACIDS RESEARCH

Cyt toxins produced by Bacillus thuringiensis: A protein fold conserved in several pathogenic microorganisms

(2012) Mario Soberón et al.   PEPTIDES

Complete genome sequence of the plant-associated Serratia plymuthica strain AS13

(2012) Saraswoti Neupane et al.   Standards in Genomic Sciences

Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9

(2012) Saraswoti Neupane et al.   Standards in Genomic Sciences

Complete genome sequence of Serratia plymuthica strain AS12

(2012) Saraswoti Neupane et al.   Standards in Genomic Sciences

Bacillus thuringiensis: A story of a successful bioinsecticide

(2011) Alejandra Bravo et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Dual transcriptional profiling of a bacterial/fungal confrontation: Collimonas fungivorans versus Aspergillus niger

(2011) Francesca Mela et al.   ISME Journal

Expression of genes of Rhizoctonia solani and the biocontrol Stachybotrys elegans during mycoparasitism of hyphae and sclerotia

(2011) Rony Chamoun et al.   MYCOLOGIA

Adaptive response to oxidative stress: Bacteria, fungi, plants and animals

(2010) Volodymyr I. Lushchak   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY

Plant-Growth-Promoting Rhizobacteria

(2009) Ben Lugtenberg et al.   Annual Review of Microbiology

Plant–microbe interactions promoting plant growth and health: perspectives for controlled use of microorganisms in agriculture

(2009) Gabriele Berg   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Nitrilase enzymes and their role in plant-microbe interactions

(2009) Andrew J. M. Howden et al.   Microbial Biotechnology

Proteomic and Transcriptomic Analysis of Aspergillus fumigatus on Exposure to Amphotericin B

(2008) P. Gautam et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

The plant pathogenic fungus Gaeumannomyces graminis var. tritici improves bacterial growth and triggers early gene regulations in the biocontrol strain Pseudomonas fluorescens Pf29Arp

(2008) M. Barret et al.   NEW PHYTOLOGIST

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

A conserved mechanism for nitrile metabolism in bacteria and plants

(2008) Andrew J. M. Howden et al.   PLANT JOURNAL