Genomic Characterization of mcr-1-carrying Salmonella enterica Serovar 4,[5],12:i:- ST 34 Clone Isolated From Pigs in China

Emerging colistin resistance in Salmonella enterica serovar Newport isolates from human infections

(2020) Mohammed Elbediwi et al.   Emerging Microbes & Infections

Epidemiological and Genomic Characterization of Campylobacter jejuni Isolates from a Foodborne Outbreak at Hangzhou, China

(2020) Hua Yu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Antimicrobial Resistance in the “Dark Matter”

(2019) Narayan Paudyal et al.   CLINICAL INFECTIOUS DISEASES

Epidemiologic and genomic insights on mcr-1-harbouring Salmonella from diarrhoeal outpatients in Shanghai, China, 2006–2016

(2019) Xin Lu et al.   EBioMedicine

Antibiotic Resistance in Salmonella Typhimurium Isolates Recovered From the Food Chain Through National Antimicrobial Resistance Monitoring System Between 1996 and 2016

(2019) Xuchu Wang et al.   Frontiers in Microbiology

Antibiotic Resistance Profiles of Salmonella Recovered From Finishing Pigs and Slaughter Facilities in Henan, China

(2019) Zenghai Jiang et al.   Frontiers in Microbiology

Antibiotic Application and Resistance in Swine Production in China: Current Situation and Future Perspectives

(2019) Hong Yang et al.   Frontiers in Veterinary Science

Emergence and Dissemination of mcr-Carrying Clinically Relevant Salmonella Typhimurium Monophasic Clone ST34

(2019) Silpak Biswas et al.   Microorganisms

Characterization of Salmonella Dublin isolated from bovine and human hosts

(2019) Narayan Paudyal et al.   BMC MICROBIOLOGY

Corrigendum: Multidrug- and colistin-resistant Salmonella enterica 4,[5],12:i:- sequence type 34 carrying the mcr-3.1 gene on the IncHI2 plasmid recovered from a human

(2019) Daniel F. Monte et al.   JOURNAL OF MEDICAL MICROBIOLOGY

A Meta-Analysis of Major Foodborne Pathogens in Chinese Food Commodities Between 2006 and 2016

(2018) Narayan Paudyal et al.   Foodborne Pathogens and Disease

Multiple Food-Animal-Borne Route in Transmission of Antibiotic-Resistant Salmonella Newport to Humans

(2018) Hang Pan et al.   Frontiers in Microbiology

Emergence of a novel mobile colistin resistance gene, mcr-8, in NDM-producing Klebsiella pneumoniae

(2018) Xiaoming Wang et al.   Emerging Microbes & Infections

Characterization of Highly Prevalent Plasmids Coharboring mcr-1, oqxAB, and blaCTX-M and Plasmids Harboring oqxAB and blaCTX-M in Escherichia coli Isolates from Food-Producing Animals in China

(2018) Bao-Tao Liu et al.   Microbial Drug Resistance

New Variant of Multidrug-Resistant Salmonella enterica Serovar Typhimurium Associated with Invasive Disease in Immunocompromised Patients in Vietnam

(2018) Alison E. Mather et al.   mBio

Salmonella harbouring the mcr-1 gene isolated from food in China between 2012 and 2016

(2018) Yujie Hu et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Characterization of a colistin-resistant Salmonella enterica 4,[5],12:i:- harbouring mcr-3.2 on a variant IncHI-2 plasmid identified in Canada

(2018) Michael R. Mulvey et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Diversified Sources for Human Infections by Salmonella enterica serovar Newport

(2018) Hang Pan et al.   Transboundary and Emerging Diseases

A Model for Transposition of the Colistin Resistance Genemcr-1by ISApl1

(2016) Erik Snesrud et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Detection of the plasmid-mediatedmcr-1gene conferring colistin resistance in human and food isolates ofSalmonella entericaandEscherichia coliin England and Wales

(2016) Michel Doumith et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Colistin resistance gene mcr-1 harboured on a multidrug resistant plasmid

(2016) Surbhi Malhotra-Kumar et al.   LANCET INFECTIOUS DISEASES

Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study

(2016) Yi-Yun Liu et al.   LANCET INFECTIOUS DISEASES

The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies

(2016) Catherine E. Yoshida et al.   PLoS One

Cleaning and disinfecting environmental surfaces in health care: Toward an integrated framework for infection and occupational illness prevention

(2015) Margaret M. Quinn et al.   AMERICAN JOURNAL OF INFECTION CONTROL

Roary: rapid large-scale prokaryote pan genome analysis

(2015) Andrew J. Page et al.   BIOINFORMATICS

One-Step Identification of Five Prominent Chicken Salmonella Serovars and Biotypes

(2015) Chunhong Zhu et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

QUAST: quality assessment tool for genome assemblies

(2013) Alexey Gurevich et al.   BIOINFORMATICS

Microbial Variome Database: Point Mutations, Adaptive or Not, in Bacterial Core Genomes

(2013) Sujay Chattopadhyay et al.   MOLECULAR BIOLOGY AND EVOLUTION

Molecular identification in monophasic and nonmotile variants ofSalmonella entericaserovar Typhimurium

(2012) M. Bugarel et al.   MicrobiologyOpen

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

(2011) Nabil-Fareed Alikhan et al.   BMC GENOMICS

Plasmid double locus sequence typing for IncHI2 plasmids, a subtyping scheme for the characterization of IncHI2 plasmids carrying extended-spectrum β-lactamase and quinolone resistance genes

(2010) Aurora García-Fernández et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

A standardized conjugation protocol to asses antibiotic resistance transfer between lactococcal species

(2008) J LAMPKOWSKA et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY