Chloroplast phylogenomic analysis of chlorophyte green algae identifies a novel lineage sister to the Sphaeropleales (Chlorophyceae)

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Chloroplast phylogenomic analysis resolves deep-level relationships within the green algal class Trebouxiophyceae

(2014) Claude Lemieux et al.   BMC EVOLUTIONARY BIOLOGY

The blood alga: phylogeny of Haematococcus (Chlorophyceae) inferred from ribosomal RNA gene sequence data

(2013) Mark A. Buchheim et al.   EUROPEAN JOURNAL OF PHYCOLOGY

Tracing the Evolution of Streptophyte Algae and Their Mitochondrial Genome

(2013) Monique Turmel et al.   Genome Biology and Evolution

Puttingincertae sedistaxa in their place: a proposal for ten new families and three new genera in Sphaeropleales (Chlorophyceae, Chlorophyta)

(2013) Karolina Fučíková et al.   JOURNAL OF PHYCOLOGY

DAMBE5: A Comprehensive Software Package for Data Analysis in Molecular Biology and Evolution

(2013) Xuhua Xia   MOLECULAR BIOLOGY AND EVOLUTION

A curious occurrence of Hazenia broadyi spec. nova in Antarctica and the review of the genus Hazenia (Ulotrichales, Chlorophyceae)

(2013) Pavel Škaloud et al.   POLAR BIOLOGY

Phylogeny and Molecular Evolution of the Green Algae

(2012) Frederik Leliaert et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Tetraflagellochloris mauritanicagen. et sp. nov. (Chlorophyceae), a New Flagellated Alga From the Mauritanian Desert: Morphology, Ultrastructure, and Phylogenetic Framing

(2012) Laura Barsanti et al.   JOURNAL OF PHYCOLOGY

POLYPHYLY OF CHAETOPHORA AND STIGEOCLONIUM WITHIN THE CHAETOPHORALES (CHLOROPHYCEAE), REVEALED BY SEQUENCE COMPARISONS OF NUCLEAR-ENCODED SSU rRNA GENES1

(2011) Lenka Caisová et al.   JOURNAL OF PHYCOLOGY

JENUFA GEN. NOV.: A NEW GENUS OF COCCOID GREEN ALGAE (CHLOROPHYCEAE, INCERTAE SEDIS) PREVIOUSLY RECORDED BY ENVIRONMENTAL SEQUENCING1

(2011) Yvonne Němcová et al.   JOURNAL OF PHYCOLOGY

Chlamydomonas neoplanoconvexa nom. nov. and its unique phylogenetic position within Volvocales (Chlorophyceae)

(2011) Takashi Nakada et al.   PHYCOLOGICAL RESEARCH

The Dunaliella salina organelle genomes: large sequences, inflated with intronic and intergenic DNA

(2010) David Smith et al.   BMC PLANT BIOLOGY

The Exceptionally Large Chloroplast Genome of the Green Alga Floydiella terrestris Illuminates the Evolutionary History of the Chlorophyceae

(2010) J. S. Brouard et al.   Genome Biology and Evolution

Ray: Simultaneous Assembly of Reads from a Mix of High-Throughput Sequencing Technologies

(2010) Sébastien Boisvert et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences

(2010) Jerome C. Regier et al.   NATURE

Light and electron microscopy and molecular phylogenetic analyses of Chloromonas pseudoplatyrhyncha (Volvocales, Chlorophyceae)

(2010) Ryo Matsuzaki et al.   PHYCOLOGICAL RESEARCH

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

The mitochondrial and plastid genomes of Volvox carteri: bloated molecules rich in repetitive DNA

(2009) David Smith et al.   BMC GENOMICS

TAXONOMIC STUDY OF TWO NEW GENERA OF FUSIFORM GREEN FLAGELLATES,TABRISGEN. NOV. ANDHAMAKKOGEN. NOV. (VOLVOCALES, CHLOROPHYCEAE)

(2009) Takashi Nakada et al.   JOURNAL OF PHYCOLOGY

EVOLUTIONARY ORIGIN OF GLOEOMONAS (VOLVOCALES, CHLOROPHYCEAE), BASED ON ULTRASTRUCTURE OF CHLOROPLASTS AND MOLECULAR PHYLOGENY1

(2009) Hisayoshi Nozaki et al.   JOURNAL OF PHYCOLOGY

Phyutility: a phyloinformatics tool for trees, alignments and molecular data

(2008) S. A. Smith et al.   BIOINFORMATICS

DEEP DIVISION IN THE CHLOROPHYCEAE (CHLOROPHYTA) REVEALED BY CHLOROPLAST PHYLOGENOMIC ANALYSES

(2008) Monique Turmel et al.   JOURNAL OF PHYCOLOGY

Molecular systematics of Volvocales (Chlorophyceae, Chlorophyta) based on exhaustive 18S rRNA phylogenetic analyses

(2008) Takashi Nakada et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION