COVID-19 Coronavirus Vaccine Design Using Reverse Vaccinology and Machine Learning
Published 2020 View Full Article
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Title
COVID-19 Coronavirus Vaccine Design Using Reverse Vaccinology and Machine Learning
Authors
Keywords
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Journal
Frontiers in Immunology
Volume 11, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2020-07-03
DOI
10.3389/fimmu.2020.01581
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Note: Only part of the references are listed.- Vaxign-ML: Supervised Machine Learning Reverse Vaccinology Model for Improved Prediction of Bacterial Protective Antigens
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- Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and coronavirus disease-2019 (COVID-19): The epidemic and the challenges
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- (2020) Daniel Wrapp et al. SCIENCE
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- (2020) Michael Letko et al. Nature Microbiology
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- (2020) Salat et al. Vaccines
- Targets of T Cell Responses to SARS-CoV-2 Coronavirus in Humans with COVID-19 Disease and Unexposed Individuals
- (2020) Alba Grifoni et al. CELL
- A Sequence Homology and Bioinformatic Approach Can Predict Candidate Targets for Immune Responses to SARS-CoV-2
- (2020) Alba Grifoni et al. Cell Host & Microbe
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- (2020) Gil Redelman-Sidi Nature Reviews Urology
- Deep‐learning contact‐map guided protein structure prediction in CASP13
- (2019) Wei Zheng et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Anti-Tat Immunity in HIV-1 Infection: Effects of Naturally Occurring and Vaccine-Induced Antibodies Against Tat on the Course of the Disease
- (2019) Aurelio Cafaro et al. Vaccines
- Updates on immunologic correlates of vaccine-induced protection
- (2019) Stanley A. Plotkin VACCINE
- VIO: ontology classification and study of vaccine responses given various experimental and analytical conditions
- (2019) Edison Ong et al. BMC BIOINFORMATICS
- Nsp3 of coronaviruses: Structures and functions of a large multi-domain protein
- (2018) Jian Lei et al. ANTIVIRAL RESEARCH
- Enhancing the Biological Relevance of Machine Learning Classifiers for Reverse Vaccinology
- (2017) Ashley Heinson et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- SMS: Smart Model Selection in PhyML
- (2017) Vincent Lefort et al. MOLECULAR BIOLOGY AND EVOLUTION
- BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes
- (2017) Martin Closter Jespersen et al. NUCLEIC ACIDS RESEARCH
- Immunogenicity of Candidate MERS-CoV DNA Vaccines Based on the Spike Protein
- (2017) Sawsan S. Al-amri et al. Scientific Reports
- Identification of New Features from Known Bacterial Protective Vaccine Antigens Enhances Rational Vaccine Design
- (2017) Edison Ong et al. Frontiers in Immunology
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- (2017) Ward Fleri et al. Frontiers in Immunology
- Airway Memory CD4 + T Cells Mediate Protective Immunity against Emerging Respiratory Coronaviruses
- (2016) Jincun Zhao et al. IMMUNITY
- CD8 + T Cells and Macrophages Regulate Pathogenesis in a Mouse Model of Middle East Respiratory Syndrome
- (2016) Christopher M. Coleman et al. JOURNAL OF VIROLOGY
- SARS and MERS: recent insights into emerging coronaviruses
- (2016) Emmie de Wit et al. NATURE REVIEWS MICROBIOLOGY
- Immunoprotective Efficacy of Acinetobacter baumannii Outer Membrane Protein, FilF, Predicted In silico as a Potential Vaccine Candidate
- (2016) Ravinder Singh et al. Frontiers in Microbiology
- Structure, Function, and Evolution of Coronavirus Spike Proteins
- (2016) Fang Li Annual Review of Virology
- Middle East Respiratory Syndrome Coronavirus: Another Zoonotic Betacoronavirus Causing SARS-Like Disease
- (2015) Jasper F. W. Chan et al. CLINICAL MICROBIOLOGY REVIEWS
- How bacterial pathogens colonize their hosts and invade deeper tissues
- (2015) David Ribet et al. MICROBES AND INFECTION
- T cell-mediated immune response to respiratory coronaviruses
- (2014) Rudragouda Channappanavar et al. IMMUNOLOGIC RESEARCH
- Prior Immunization with Severe Acute Respiratory Syndrome (SARS)-Associated Coronavirus (SARS-CoV) Nucleocapsid Protein Causes Severe Pneumonia in Mice Infected with SARS-CoV
- (2014) F. Yasui et al. JOURNAL OF IMMUNOLOGY
- Genome-wide prediction of vaccine targets for human herpes simplex viruses using Vaxign reverse vaccinology
- (2013) Zuoshuang Xiang et al. BMC BIOINFORMATICS
- Epidemiological and clinical features of human coronavirus infections among different subsets of patients
- (2013) Tatiane K. Cabeça et al. Influenza and Other Respiratory Viruses
- Complete Protection against Severe Acute Respiratory Syndrome Coronavirus-Mediated Lethal Respiratory Disease in Aged Mice by Immunization with a Mouse-Adapted Virus Lacking E Protein
- (2013) C. Fett et al. JOURNAL OF VIROLOGY
- Alphavirus-based Vaccines Encoding Nonstructural Proteins of Hepatitis C Virus Induce Robust and Protective T-cell Responses
- (2013) Peng Peng Ip et al. MOLECULAR THERAPY
- Updates on the web-based VIOLIN vaccine database and analysis system
- (2013) Yongqun He et al. NUCLEIC ACIDS RESEARCH
- Comprehensive analysis of dengue virus-specific responses supports an HLA-linked protective role for CD8+ T cells
- (2013) D. Weiskopf et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease
- (2012) Rachel L Graham et al. NATURE MEDICINE
- Preexisting influenza-specific CD4+ T cells correlate with disease protection against influenza challenge in humans
- (2012) Tom M Wilkinson et al. NATURE MEDICINE
- Emerging Vaccine Informatics
- (2011) Yongqun He et al. JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY
- Lack of Peripheral Memory B Cell Responses in Recovered Patients with Severe Acute Respiratory Syndrome: A Six-Year Follow-Up Study
- (2011) F. Tang et al. JOURNAL OF IMMUNOLOGY
- Improving reverse vaccinology with a machine learning approach
- (2011) Brett N. Bowman et al. VACCINE
- Vaxign: The First Web-Based Vaccine Design Program for Reverse Vaccinology and Applications for Vaccine Development
- (2010) Yongqun He et al. JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY
- T Cell Responses Are Required for Protection from Clinical Disease and for Virus Clearance in Severe Acute Respiratory Syndrome Coronavirus-Infected Mice
- (2010) J. Zhao et al. JOURNAL OF VIROLOGY
- Protegen: a web-based protective antigen database and analysis system
- (2010) Brian Yang et al. NUCLEIC ACIDS RESEARCH
- SARS vaccines: where are we?
- (2009) Rachel L Roper et al. Expert Review of Vaccines
- Preclinical and Clinical Development of a Multi-Envelope, DNA-Virus-Protein (D-V-P) HIV-1 Vaccine
- (2009) Robert Sealy et al. INTERNATIONAL REVIEWS OF IMMUNOLOGY
- SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building
- (2009) M. Gouy et al. MOLECULAR BIOLOGY AND EVOLUTION
- Coronaviruses post-SARS: update on replication and pathogenesis
- (2009) Stanley Perlman et al. NATURE REVIEWS MICROBIOLOGY
- Severe acute respiratory syndrome vaccine efficacy in ferrets: whole killed virus and adenovirus-vectored vaccines
- (2008) R. H. See et al. JOURNAL OF GENERAL VIROLOGY
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