4.6 Article

MR-Forest: A Deep Decision Framework for False Positive Reduction in Pulmonary Nodule Detection

Journal

IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS
Volume 24, Issue 6, Pages 1652-1663

Publisher

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC
DOI: 10.1109/JBHI.2019.2947506

Keywords

Feature extraction; Forestry; Three-dimensional displays; Harmonic analysis; Artificial neural networks; Task analysis; Computed tomography; False positive reduction; spherical surface feature; deep decision; ORFs; computer tomography

Funding

  1. National Key Research and Development Program [2018YFB1702003]
  2. National Science Foundation of China [61806048]
  3. Open Program of Neusoft Research of Intelligent Healthcare Technology, Co. Ltd. [NRIHTOP1802]
  4. Fundamental Research Funds for the Central Universities [N180716019]

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With the development of deep learning methods such as convolutional neural network (CNN), the accuracy of automated pulmonary nodule detection has been greatly improved. However, the high computational and storage costs of the large-scale network have been a potential concern for the future widespread clinical application. In this paper, an alternative Multi-ringed (MR)-Forest framework, against the resource-consuming neural networks (NN)-based architectures, has been proposed for false positive reduction in pulmonary nodule detection, which consists of three steps. First, a novel multi-ringed scanning method is used to extract the order ring facets (ORFs) from the surface voxels of the volumetric nodule models; Second, Mesh-LBP and mapping deformation are employed to estimate the texture and shape features. By sliding and resampling the multi-ringed ORFs, feature volumes with different lengths are generated. Finally, the outputs of multi-level are cascaded to predict the candidate class. On 1034 scans merging the dataset from the Affiliated Hospital of Liaoning University of Traditional Chinese Medicine (AH-LUTCM) and the LUNA16 Challenge dataset, our framework performs enough competitiveness than state-of-the-art in false positive reduction task (CPM score of 0.865). Experimental results demonstrate that MR-Forest is a successful solution to satisfy both resource-consuming and effectiveness for automated pulmonary nodule detection. The proposed MR-forest is a general architecture for 3D target detection, it can be easily extended in many other medical imaging analysis tasks, where the growth trend of the targeting object is approximated as a spheroidal expansion.

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