Aerobic microbial life persists in oxic marine sediment as old as 101.5 million years

Persistent organic matter in oxic subseafloor sediment

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Microbial dormancy in the marine subsurface: Global endospore abundance and response to burial

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Assessment of Capacity to Capture DNA Aerosols by Clean Filters for Molecular Biology Experiments

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The biomass distribution on Earth

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Necromass as a Limited Source of Energy for Microorganisms in Marine Sediments

(2018) James A. Bradley et al.   Journal of Geophysical Research-Biogeosciences

Abundance and distribution of Archaea in the subseafloor sedimentary biosphere

(2018) Tatsuhiko Hoshino et al.   ISME Journal

The biomass and biodiversity of the continental subsurface

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Geophysical constraints on microbial biomass in subseafloor sediments and coal seams down to 2.5 km off Shimokita Peninsula, Japan

(2018) Wataru Tanikawa et al.   Progress in Earth and Planetary Science

Methyl-compound use and slow growth characterize microbial life in 2-km-deep subseafloor coal and shale beds

(2017) Elizabeth Trembath-Reichert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cobalt-based age models of pelagic clay in the South Pacific Gyre

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Complete nitrification by Nitrospira bacteria

(2015) Holger Daims et al.   NATURE

Presence of oxygen and aerobic communities from sea floor to basement in deep-sea sediments

(2015) Steven D’Hondt et al.   Nature Geoscience

Cenozoic bathyal and abyssal ostracods beneath the oligotrophic South Pacific Gyre (IODP Expedition 329 Sites U1367, U1368 and U1370)

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Exploring deep microbial life in coal-bearing sediment down to  2.5 km below the ocean floor

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Power limits for microbial life

(2015) Douglas E. LaRowe et al.   Frontiers in Microbiology

Hot-Alkaline DNA Extraction Method for Deep-Subseafloor Archaeal Communities

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Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

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Evolution of sediment permeability during burial and subduction

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Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

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Predominant archaea in marine sediments degrade detrital proteins

(2013) Karen G. Lloyd et al.   NATURE

Microbial life under extreme energy limitation

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The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks

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Spatial Variations in Microbial Community Composition in Surface Seawater from the Ultra-Oligotrophic Center to Rim of the South Pacific Gyre

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Microbial communities associated with ferromanganese nodules and the surrounding sediments

(2013) Benjamin J. Tully et al.   Frontiers in Microbiology

Paenibacillus oceanisediminis sp. nov. isolated from marine sediment

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Endospore abundance, microbial growth and necromass turnover in deep sub-seafloor sediment

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Fiji: an open-source platform for biological-image analysis

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NIH Image to ImageJ: 25 years of image analysis

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

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Segmentation of Multi-Isotope Imaging Mass Spectrometry Data for Semi-Automatic Detection of Regions of Interest

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Global distribution of microbial abundance and biomass in subseafloor sediment

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Microbial diversity and stratification of South Pacific abyssal marine sediments

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New cell extraction procedure applied to deep subsurface sediments

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Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Sedimentary membrane lipids recycled by deep-sea benthic archaea

(2010) Yoshinori Takano et al.   Nature Geoscience

QIIME allows analysis of high-throughput community sequencing data

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Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Discriminative detection and enumeration of microbial life in marine subsurface sediments

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Significant contribution of Archaea to extant biomass in marine subsurface sediments

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