Poincaré maps for analyzing complex hierarchies in single-cell data
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Poincaré maps for analyzing complex hierarchies in single-cell data
Authors
Keywords
-
Journal
Nature Communications
Volume 11, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-06-11
DOI
10.1038/s41467-020-16822-4
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- A lineage-resolved molecular atlas of C. elegans embryogenesis at single-cell resolution
- (2019) Jonathan S. Packer et al. SCIENCE
- Visualizing structure and transitions in high-dimensional biological data
- (2019) Kevin R. Moon et al. NATURE BIOTECHNOLOGY
- Billion-Scale Similarity Search with GPUs
- (2019) Jeff Johnson et al. IEEE Transactions on Big Data
- Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment
- (2018) Elham Azizi et al. CELL
- Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics
- (2018) Mireya Plass et al. SCIENCE
- Interpretable dimensionality reduction of single cell transcriptome data with deep generative models
- (2018) Jiarui Ding et al. Nature Communications
- zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs
- (2018) Swati Parekh et al. GigaScience
- Deep generative modeling for single-cell transcriptomics
- (2018) Romain Lopez et al. NATURE METHODS
- Scaling single-cell genomics from phenomenology to mechanism
- (2017) Amos Tanay et al. NATURE
- Power analysis of single-cell RNA-sequencing experiments
- (2017) Valentine Svensson et al. NATURE METHODS
- Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning
- (2017) Bo Wang et al. NATURE METHODS
- Reversed graph embedding resolves complex single-cell trajectories
- (2017) Xiaojie Qiu et al. NATURE METHODS
- In situ click chemistry generation of cyclooxygenase-2 inhibitors
- (2017) Atul Bhardwaj et al. Nature Communications
- A single-cell resolution map of mouse hematopoietic stem and progenitor cell differentiation
- (2016) S. Nestorowa et al. BLOOD
- Single-cell analysis of mixed-lineage states leading to a binary cell fate choice
- (2016) Andre Olsson et al. NATURE
- Wishbone identifies bifurcating developmental trajectories from single-cell data
- (2016) Manu Setty et al. NATURE BIOTECHNOLOGY
- Diffusion pseudotime robustly reconstructs lineage branching
- (2016) Laleh Haghverdi et al. NATURE METHODS
- Diffusion maps for high-dimensional single-cell analysis of differentiation data
- (2015) Laleh Haghverdi et al. BIOINFORMATICS
- Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells
- (2015) Allon M. Klein et al. CELL
- Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors
- (2015) Franziska Paul et al. CELL
- Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis
- (2015) Jacob H. Levine et al. CELL
- Decoding the regulatory network of early blood development from single-cell gene expression measurements
- (2015) Victoria Moignard et al. NATURE BIOTECHNOLOGY
- Single-Cell Trajectory Detection Uncovers Progression and Regulatory Coordination in Human B Cell Development
- (2014) Sean C. Bendall et al. CELL
- The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
- (2014) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- ForceAtlas2, a Continuous Graph Layout Algorithm for Handy Network Visualization Designed for the Gephi Software
- (2014) Mathieu Jacomy et al. PLoS One
- Bifurcation analysis of single-cell gene expression data reveals epigenetic landscape
- (2014) Eugenio Marco et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Stochastic Gradient Descent on Riemannian Manifolds
- (2013) Silvere Bonnabel IEEE TRANSACTIONS ON AUTOMATIC CONTROL
- Bistability, Bifurcations, and Waddington's Epigenetic Landscape
- (2012) James E. Ferrell CURRENT BIOLOGY
- Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE
- (2011) Peng Qiu et al. NATURE BIOTECHNOLOGY
- Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum
- (2011) S. C. Bendall et al. SCIENCE
- Scale-independent quality criteria for dimensionality reduction
- (2010) John A. Lee et al. PATTERN RECOGNITION LETTERS
- Fast unfolding of communities in large networks
- (2008) Vincent D Blondel et al. JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT
- Spanning forests and the golden ratio
- (2007) Pavel Chebotarev DISCRETE APPLIED MATHEMATICS
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now