Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids
Authors
Keywords
-
Journal
Nature Communications
Volume 11, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-07-17
DOI
10.1038/s41467-020-17278-2
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Systematics: The Cohesive Nature of Bacterial Species Taxa
- (2019) Frederick M. Cohan CURRENT BIOLOGY
- Host Range and Genetic Plasticity Explain the Coexistence of Integrative and Extrachromosomal Mobile Genetic Elements
- (2018) Jean Cury et al. MOLECULAR BIOLOGY AND EVOLUTION
- A fast adaptive algorithm for computing whole-genome homology maps
- (2018) Chirag Jain et al. BIOINFORMATICS
- Evolution and typing of IncC plasmids contributing to antibiotic resistance in Gram-negative bacteria
- (2018) Stephanie J. Ambrose et al. PLASMID
- Database resources of the National Center for Biotechnology Information
- (2017) et al. NUCLEIC ACIDS RESEARCH
- Sampling the mobile gene pool: innovation via horizontal gene transfer in bacteria
- (2017) James P. J. Hall et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Emerging patterns of plasmid-host coevolution that stabilize antibiotic resistance
- (2017) Thibault Stalder et al. Scientific Reports
- AcCNET (Accessory Genome Constellation Network): comparative genomics software for accessory genome analysis using bipartite networks
- (2016) Val F. Lanza et al. BIOINFORMATICS
- How clonal are bacteria over time?
- (2016) B Jesse Shapiro CURRENT OPINION IN MICROBIOLOGY
- Inevitability of Genetic Parasites
- (2016) Jaime Iranzo et al. Genome Biology and Evolution
- Metal stressors consistently modulate bacterial conjugal plasmid uptake potential in a phylogenetically conserved manner
- (2016) Uli Klümper et al. ISME Journal
- Phylogenomic networks reveal limited phylogenetic range of lateral gene transfer by transduction
- (2016) Ovidiu Popa et al. ISME Journal
- Survival and Evolution of a Large Multidrug Resistance Plasmid in New Clinical Bacterial Hosts
- (2016) Andreas Porse et al. MOLECULAR BIOLOGY AND EVOLUTION
- Mobile genes in the human microbiome are structured from global to individual scales
- (2016) I. L. Brito et al. NATURE
- Evolutionary Paths That Expand Plasmid Host-Range: Implications for Spread of Antibiotic Resistance
- (2015) Wesley Loftie-Eaton et al. MOLECULAR BIOLOGY AND EVOLUTION
- Horizontal gene transfer: building the web of life
- (2015) Shannon M. Soucy et al. NATURE REVIEWS GENETICS
- Microbial species delineation using whole genome sequences
- (2015) Neha J. Varghese et al. NUCLEIC ACIDS RESEARCH
- Fine-scale diversity and extensive recombination in a quasisexual bacterial population occupying a broad niche
- (2015) M. J. Rosen et al. SCIENCE
- In SilicoDetection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing
- (2014) Alessandra Carattoli et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community
- (2014) Uli Klümper et al. ISME Journal
- ForceAtlas2, a Continuous Graph Layout Algorithm for Handy Network Visualization Designed for the Gephi Software
- (2014) Mathieu Jacomy et al. PLoS One
- Ordering microbial diversity into ecologically and genetically cohesive units
- (2014) B. Jesse Shapiro et al. TRENDS IN MICROBIOLOGY
- kClust: fast and sensitive clustering of large protein sequence databases
- (2013) Maria Hauser et al. BMC BIOINFORMATICS
- Host range diversification within the IncP-1 plasmid group
- (2013) H. Yano et al. MICROBIOLOGY-SGM
- Horizontal gene transfer and the evolution of bacterial and archaeal population structure
- (2013) Martin F. Polz et al. TRENDS IN GENETICS
- Inferring the Evolutionary History of IncP-1 Plasmids Despite Incongruence among Backbone Gene Trees
- (2012) Diya Sen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Expansion of the IncX plasmid family for improved identification and typing of novel plasmids in drug-resistant Enterobacteriaceae
- (2012) Timothy J. Johnson et al. PLASMID
- Population Genomics of Early Events in the Ecological Differentiation of Bacteria
- (2012) B. J. Shapiro et al. SCIENCE
- Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes
- (2011) O. Popa et al. GENOME RESEARCH
- Multilocus sequence typing of IncN plasmids
- (2011) Aurora García-Fernández et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Ecology drives a global network of gene exchange connecting the human microbiome
- (2011) Chris S. Smillie et al. NATURE
- Biased gene transfer in microbial evolution
- (2011) Cheryl P. Andam et al. NATURE REVIEWS MICROBIOLOGY
- The IncP-1 plasmid backbone adapts to different host bacterial species and evolves through homologous recombination
- (2011) Peter Norberg et al. Nature Communications
- The Tree and Net Components of Prokaryote Evolution
- (2010) Pere Puigbò et al. Genome Biology and Evolution
- Replicon sequence typing of IncF plasmids carrying virulence and resistance determinants
- (2010) Laura Villa et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Predicting Plasmid Promiscuity Based on Genomic Signature
- (2010) H. Suzuki et al. JOURNAL OF BACTERIOLOGY
- Mobility of Plasmids
- (2010) C. Smillie et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Impact of recombination on bacterial evolution
- (2010) Xavier Didelot et al. TRENDS IN MICROBIOLOGY
- On the origin of prokaryotic species
- (2009) W. F. Doolittle et al. GENOME RESEARCH
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Community detection in graphs
- (2009) Santo Fortunato PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS
- Microbial diversity and the genetic nature of microbial species
- (2008) Mark Achtman et al. NATURE REVIEWS MICROBIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now