A colorimetric RT-LAMP assay and LAMP-sequencing for detecting SARS-CoV-2 RNA in clinical samples

A Novel Coronavirus from Patients with Pneumonia in China, 2019

(2020) Na Zhu et al.   NEW ENGLAND JOURNAL OF MEDICINE

Rapid Detection of COVID-19 Coronavirus Using a Reverse Transcriptional Loop-Mediated Isothermal Amplification (RT-LAMP) Diagnostic Platform

(2020) Lin Yu et al.   CLINICAL CHEMISTRY

An alternative workflow for molecular detection of SARS-CoV-2 – escape from the NA extraction kit-shortage, Copenhagen, Denmark, March 2020

(2020) Anna S. Fomsgaard et al.   Eurosurveillance

Estimating the asymptomatic proportion of coronavirus disease 2019 (COVID-19) cases on board the Diamond Princess cruise ship, Yokohama, Japan, 2020

(2020) Kenji Mizumoto et al.   Eurosurveillance

Virological assessment of hospitalized patients with COVID-2019

(2020) Roman Wölfel et al.   NATURE

CRISPR–Cas12-based detection of SARS-CoV-2

(2020) James P. Broughton et al.   NATURE BIOTECHNOLOGY

Presymptomatic SARS-CoV-2 Infections and Transmission in a Skilled Nursing Facility

(2020) Melissa M. Arons et al.   NEW ENGLAND JOURNAL OF MEDICINE

Intensive care management of coronavirus disease 2019 (COVID-19): challenges and recommendations

(2020) Jason Phua et al.   Lancet Respiratory Medicine

Rapid detection of novel coronavirus/Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by reverse transcription-loop-mediated isothermal amplification

(2020) Laura E. Lamb et al.   PLoS One

COVID-19 diagnostics in context

(2020) Ralph Weissleder et al.   Science Translational Medicine

Rapid Direct Nucleic Acid Amplification Test without RNA Extraction for SARS-CoV-2 Using a Portable PCR Thermocycler

(2020) Soon Keong Wee et al.   Genes

Analytical sensitivity and efficiency comparisons of SARS-CoV-2 RT–qPCR primer–probe sets

(2020) Chantal B. F. Vogels et al.   Nature Microbiology

Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast

(2019) Benjamin C. Buchmuller et al.   Nature Communications

Loop-Mediated Isothermal Amplification (LAMP) for the Diagnosis of Zika Virus: A Review

(2019) Severino Jefferson Ribeiro da Silva et al.   Viruses-Basel

Genome-wide C-SWAT library for high-throughput yeast genome tagging

(2018) Matthias Meurer et al.   NATURE METHODS

Real-time Detection and Monitoring of Loop Mediated Amplification (LAMP) Reaction Using Self-quenching and De-quenching Fluorogenic Probes

(2018) Vijay J. Gadkar et al.   Scientific Reports

Rapid and specific detection of Asian- and African-lineage Zika viruses

(2017) Nunya Chotiwan et al.   Science Translational Medicine

Large-Scale Low-Cost NGS Library Preparation Using a Robust Tn5 Purification and Tagmentation Protocol

(2017) Bianca P. Hennig et al.   G3-Genes Genomes Genetics

Visual detection of isothermal nucleic acid amplification using pH-sensitive dyes

(2015) Nathan A. Tanner et al.   BIOTECHNIQUES

Tn5 transposase and tagmentation procedures for massively scaled sequencing projects

(2014) Simone Picelli et al.   GENOME RESEARCH

Evaluation of a Direct Reverse Transcription Loop-Mediated Isothermal Amplification Method without RNA Extraction for the Detection of Human Enterovirus 71 Subgenotype C4 in Nasopharyngeal Swab Specimens

(2012) Kai Nie et al.   PLoS One

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Detection of noroviruses in fecal specimens by direct RT-PCR without RNA purification

(2009) Naoyuki Nishimura et al.   JOURNAL OF VIROLOGICAL METHODS

Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products

(2008) Norihiro Tomita et al.   Nature Protocols