Combining physicochemical properties and microbiome data to evaluate the water quality of South African drinking water production plants

Identification of Factors Affecting Bacterial Abundance and Community Structures in a Full-Scale Chlorinated Drinking Water Distribution System

(2019) Vanessa Dias et al.   Water

A comparative assessment of conventional and molecular methods, including MinION nanopore sequencing, for surveying water quality

(2019) Kishor Acharya et al.   Scientific Reports

The occurrence of natural organic matter in South African water treatment plants

(2019) Pfano Tshindane et al.   Journal of Water Process Engineering

Cholera outbreak caused by drinking contaminated water from a lakeshore water-collection site, Kasese District, south-western Uganda, June-July 2015

(2018) Gerald Pande et al.   PLoS One

Changes in the Drinking Water Microbiome: Effects of Water Treatments Along the Flow of Two Drinking Water Treatment Plants in a Urbanized Area, Milan (Italy)

(2018) Antonia Bruno et al.   Frontiers in Microbiology

MicrobiomeAnalyst: a web-based tool for comprehensive statistical, visual and meta-analysis of microbiome data

(2017) Achal Dhariwal et al.   NUCLEIC ACIDS RESEARCH

Microbiological safety of a small water distribution system: evaluating potentially pathogenic bacteria using advanced sequencing techniques

(2017) A. M. M. Batista et al.   Water Science and Technology-Water Supply

Atrazine Exposure in Public Drinking Water and Preterm Birth

(2017) Jessica L. Rinsky et al.   PUBLIC HEALTH REPORTS

Detection of Antibiotic Resistance Genes in Source and Drinking Water Samples from a First Nations Community in Canada

(2016) Dinesh M. Fernando et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Water security in South Africa: perceptions on public expectations and municipal obligations, governance and water re-use

(2016) S Sershen et al.   WATER SA

Legionella pneumophila: The Paradox of a Highly Sensitive Opportunistic Waterborne Pathogen Able to Persist in the Environment

(2016) Jean-Marc Berjeaud et al.   Frontiers in Microbiology

Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer

(2016) Alfonso Benítez-Páez et al.   GigaScience

Analysis of physico-chemical and bacteriological quality of drinking water in Mafikeng, South Africa

(2015) Suma George Mulamattathil et al.   JOURNAL OF WATER AND HEALTH

Microbial Communities Can Be Described by Metabolic Structure: A General Framework and Application to a Seasonally Variable, Depth-Stratified Microbial Community from the Coastal West Antarctic Peninsula

(2015) Jeff S. Bowman et al.   PLoS One

Chlorination at Treatment Plant and Drinking Water Quality: A Case Study of Different Sectors of Islamabad, Pakistan

(2014) Sara Qaiser et al.   ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

Evaluation of quantitative PCR combined with PMA treatment for molecular assessment of microbial water quality

(2014) Eva Theres Gensberger et al.   WATER RESEARCH

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Clostridium difficile contamination of public tap water distribution system during a waterborne outbreak in Finland

(2013) Saara M. Kotila et al.   SCANDINAVIAN JOURNAL OF PUBLIC HEALTH

Metagenomic analysis reveals significant changes of microbial compositions and protective functions during drinking water treatment

(2013) Yuanqing Chao et al.   Scientific Reports

Metagenomic Analyses of Drinking Water Receiving Different Disinfection Treatments

(2012) Vicente Gomez-Alvarez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PANDAseq: paired-end assembler for illumina sequences

(2012) Andre P Masella et al.   BMC BIOINFORMATICS

METAGENassist: a comprehensive web server for comparative metagenomics

(2012) D. Arndt et al.   NUCLEIC ACIDS RESEARCH

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

Microbial Monitoring of Surface Water in South Africa: An Overview

(2012) Catherine D. Luyt et al.   International Journal of Environmental Research and Public Health

16S rRNA Gene Sequence Analysis of Drinking Water Using RNA and DNA Extracts as Targets for Clone Library Development

(2011) Randy P. Revetta et al.   CURRENT MICROBIOLOGY

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Global Water Pollution and Human Health

(2010) René P. Schwarzenbach et al.   Annual Review of Environment and Resources

Health Risk from the Use of Roof-Harvested Rainwater in Southeast Queensland, Australia, as Potable or Nonpotable Water, Determined Using Quantitative Microbial Risk Assessment

(2010) W. Ahmed et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing Analysis of Bacterial Biofilm Communities in Water Meters of a Drinking Water Distribution System

(2010) P.-Y. Hong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS