Transcriptional interference at tandem lncRNA and protein-coding genes: an emerging theme in regulation of cellular nutrient homeostasis

Gene-Specific Control of tRNA Expression by RNA Polymerase II

(2020) Alan Gerber et al.   MOLECULAR CELL

Inositol Pyrophosphates: Signaling Molecules with Pleiotropic Actions in Mammals

(2020) Seulgi Lee et al.   MOLECULES

Vip1 is a kinase and pyrophosphatase switch that regulates inositol diphosphate signaling

(2020) D. Eric Dollins et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nutrient-dependent control of RNA polymerase II elongation rate regulates specific gene expression programs by alternative polyadenylation

(2020) Carlo Yague-Sanz et al.   GENES & DEVELOPMENT

Structure of fission yeast transcription factor Pho7 bound to pho1 promoter DNA and effect of Pho7 mutations on DNA binding and phosphate homeostasis

(2019) Angad Garg et al.   MOLECULAR AND CELLULAR BIOLOGY

Inositol pyrophosphates impact phosphate homeostasis via modulation of RNA 3′ processing and transcription termination

(2019) Ana M Sanchez et al.   NUCLEIC ACIDS RESEARCH

A long noncoding (lnc)RNA governs expression of the phosphate transporter Pho84 in fission yeast and has cascading effects on the flankingprtlncRNA andpho1genes

(2018) Angad Garg et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Asp1 Bifunctional Activity Modulates Spindle Function via Controlling Cellular Inositol Pyrophosphate Levels in Schizosaccharomyces pombe

(2018) Marina Pascual-Ortiz et al.   MOLECULAR AND CELLULAR BIOLOGY

RNA polymerase II CTD interactome with 3′ processing and termination factors in fission yeast and its impact on phosphate homeostasis

(2018) Ana M. Sanchez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA polymerase II components and Rrn7 form a preinitiation complex on the HomolD box to promote ribosomal protein gene expression inSchizosaccharomyces pombe

(2017) Matías Montes et al.   FEBS Journal

Poly(A) site choice and Pol2 CTD Serine-5 status govern lncRNA control of phosphate-responsive tgp1 gene expression in fission yeast

(2017) Ana M. Sanchez et al.   RNA

Eukaryotic Phosphate Homeostasis: The Inositol Pyrophosphate Perspective

(2017) Cristina Azevedo et al.   TRENDS IN BIOCHEMICAL SCIENCES

Defining the DNA Binding Site Recognized by the Fission Yeast Zn 2 Cys 6 Transcription Factor Pho7 and Its Role in Phosphate Homeostasis

(2017) Beate Schwer et al.   mBio

Transcription-coupled changes to chromatin underpin gene silencing by transcriptional interference

(2016) Ryan Ard et al.   NUCLEIC ACIDS RESEARCH

Transcription of lncRNAprt, clusteredprtRNA sites for Mmi1 binding, and RNA polymerase II CTD phospho-sites govern the repression ofpho1gene expression under phosphate-replete conditions in fission yeast

(2016) Debashree Chatterjee et al.   RNA

Regulation of chaperone binding and nucleosome dynamics by key residues within the globular domain of histone H3

(2016) Sarah J. Hainer et al.   Epigenetics & Chromatin

Dissection of the PHO pathway in Schizosaccharomyces pombe using epistasis and the alternate repressor adenine

(2014) Molly Estill et al.   CURRENT GENETICS

Casein kinase 2 inhibits HomolD-directed transcription by Rrn7 inSchizosaccharomyces pombe

(2014) Sandra Moreira-Ramos et al.   FEBS Journal

lncRNA recruits RNAi and the exosome to dynamically regulate pho1 expression in response to phosphate levels in fission yeast

(2014) S. Shah et al.   GENES & DEVELOPMENT

Conservation of PHO pathway in ascomycetes and the role of Pho84

(2014) Parul Tomar et al.   JOURNAL OF BIOSCIENCES

Roadblock Termination by Reb1p Restricts Cryptic and Readthrough Transcription

(2014) Jessie Colin et al.   MOLECULAR CELL

Individual letters of the RNA polymerase II CTD code govern distinct gene expression programs in fission yeast

(2014) B. Schwer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Long non-coding RNA-mediated transcriptional interference of a permease gene confers drug tolerance in fission yeast

(2014) Ryan Ard et al.   Nature Communications

CPF-Associated Phosphatase Activity Opposes Condensin-Mediated Chromosome Condensation

(2014) Vincent Vanoosthuyse et al.   PLoS Genetics

Mtr4-like Protein Coordinates Nuclear RNA Processing for Heterochromatin Assembly and for Telomere Maintenance

(2013) Nathan N. Lee et al.   CELL

Genome-Wide Characterization of the Phosphate Starvation Response in Schizosaccharomyces pombe

(2012) Ian Carter-O’Connell et al.   BMC GENOMICS

Transcription of Two Long Noncoding RNAs Mediates Mating-Type Control of Gametogenesis in Budding Yeast

(2012) Folkert J. van Werven et al.   CELL

Transcriptional regulation of phosphate acquisition by higher plants

(2012) Ajay Jain et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Identification of Mutant Versions of the Spt16 Histone Chaperone That Are Defective for Transcription-Coupled Nucleosome Occupancy in Saccharomyces cerevisiae

(2012) Sarah J. Hainer et al.   G3-Genes Genomes Genetics

The Paf1 Complex Represses SER3 Transcription in Saccharomyces cerevisiae by Facilitating Intergenic Transcription-Dependent Nucleosome Occupancy of the SER3 Promoter

(2011) Justin A. Pruneski et al.   EUKARYOTIC CELL

Rrn7 Protein, an RNA Polymerase I Transcription Factor, Is Required for RNA Polymerase II-dependent Transcription Directed by Core Promoters with a HomolD Box Sequence

(2011) Diego A. Rojas et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Identification of Histone Mutants That Are Defective for Transcription-Coupled Nucleosome Occupancy

(2011) S. J. Hainer et al.   MOLECULAR AND CELLULAR BIOLOGY

Transcription Regulation by the Noncoding RNA SRG1 Requires Spt2-Dependent Chromatin Deposition in the Wake of RNA Polymerase II

(2011) P. Thebault et al.   MOLECULAR AND CELLULAR BIOLOGY

Systematic Screen of Schizosaccharomyces pombe Deletion Collection Uncovers Parallel Evolution of the Phosphate Signal Transduction Pathway in Yeasts

(2010) Theresa C. Henry et al.   EUKARYOTIC CELL

Intergenic transcription causes repression by directing nucleosome assembly

(2010) S. J. Hainer et al.   GENES & DEVELOPMENT

U3 snoRNA promoter reflects the RNA’s function in ribosome biogenesis

(2008) Sadeq Nabavi et al.   CURRENT GENETICS