Responsible, practical genomic data sharing that accelerates research
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Responsible, practical genomic data sharing that accelerates research
Authors
Keywords
-
Journal
NATURE REVIEWS GENETICS
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-07-21
DOI
10.1038/s41576-020-0257-5
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The citation advantage of linking publications to research data
- (2020) Giovanni Colavizza et al. PLoS One
- Federated discovery and sharing of genomic data using Beacons
- (2019) Marc Fiume et al. NATURE BIOTECHNOLOGY
- The Missing Diversity in Human Genetic Studies
- (2019) Giorgio Sirugo et al. CELL
- Data sharing and how it can benefit your scientific career
- (2019) Gabriel Popkin NATURE
- The Kipoi repository accelerates community exchange and reuse of predictive models for genomics
- (2019) Žiga Avsec et al. NATURE BIOTECHNOLOGY
- Decomposing Cell Identity for Transfer Learning across Cellular Measurements, Platforms, Tissues, and Species
- (2019) Genevieve L. Stein-O’Brien et al. Cell Systems
- MultiPLIER: A Transfer Learning Framework for Transcriptomics Reveals Systemic Features of Rare Disease
- (2019) Jaclyn N. Taroni et al. Cell Systems
- The GATK joint genotyping workflow is appropriate for calling variants in RNA-seq experiments
- (2019) Jean-Simon Brouard et al. Journal of Animal Science and Biotechnology
- Barriers to accessing public cancer genomic data
- (2019) Katrina Learned et al. Scientific Data
- Clinical Trial Participants’ Views of the Risks and Benefits of Data Sharing
- (2018) Michelle M. Mello et al. NEW ENGLAND JOURNAL OF MEDICINE
- Data sharing in PLOS ONE: An analysis of Data Availability Statements
- (2018) Lisa M. Federer et al. PLoS One
- A funder-imposed data publication requirement seldom inspired data sharing
- (2018) Jessica L. Couture et al. PLoS One
- Assessment of the impact of shared brain imaging data on the scientific literature
- (2018) Michael P. Milham et al. Nature Communications
- Structural absorption by barbule microstructures of super black bird of paradise feathers
- (2018) Dakota E. McCoy et al. Nature Communications
- No more excuses for non-reproducible methods
- (2018) Lenny Teytelman NATURE
- We will find you: DNA search used to nab Golden State Killer can home in on about 60% of white Americans
- (2018) Jocelyn Kaiser SCIENCE
- Identity inference of genomic data using long-range familial searches
- (2018) Yaniv Erlich et al. SCIENCE
- Early Career Researchers Embrace Data Sharing
- (2018) Hamish A. Campbell et al. TRENDS IN ECOLOGY & EVOLUTION
- Strains, functions and dynamics in the expanded Human Microbiome Project
- (2017) Jason Lloyd-Price et al. NATURE
- Reproducibility of computational workflows is automated using continuous analysis
- (2017) Brett K Beaulieu-Jones et al. NATURE BIOTECHNOLOGY
- Celebrating parasites
- (2017) Casey S Greene et al. NATURE GENETICS
- Prioritizing diversity in human genomics research
- (2017) Lucia A. Hindorff et al. NATURE REVIEWS GENETICS
- Data Sharing from Clinical Trials — A Research Funder’s Perspective
- (2017) Robert Kiley et al. NEW ENGLAND JOURNAL OF MEDICINE
- Data-Sharing Models
- (2017) NEW ENGLAND JOURNAL OF MEDICINE
- Data check: U.S. government share of basic research funding falls below 50%
- (2017) Jeffrey Mervis SCIENCE
- Systematic integration of biomedical knowledge prioritizes drugs for repurposing
- (2017) Daniel Scott Himmelstein et al. eLife
- Unsupervised Extraction of Stable Expression Signatures from Public Compendia with an Ensemble of Neural Networks
- (2017) Jie Tan et al. Cell Systems
- Are Data Sharing and Privacy Protection Mutually Exclusive?
- (2016) Yann Joly et al. CELL
- Basset: learning the regulatory code of the accessible genome with deep convolutional neural networks
- (2016) David R. Kelley et al. GENOME RESEARCH
- Development and Validation of a Deep Learning Algorithm for Detection of Diabetic Retinopathy in Retinal Fundus Photographs
- (2016) Varun Gulshan et al. JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- Legal confusion threatens to slow data science
- (2016) Simon Oxenham NATURE
- Analysis of protein-coding genetic variation in 60,706 humans
- (2016) Monkol Lek et al. NATURE
- Data Sharing
- (2016) Dan L. Longo et al. NEW ENGLAND JOURNAL OF MEDICINE
- Avoiding Data Dumpsters — Toward Equitable and Useful Data Sharing
- (2016) Laura Merson et al. NEW ENGLAND JOURNAL OF MEDICINE
- A federated ecosystem for sharing genomic, clinical data
- (2016) SCIENCE
- An open access pilot freely sharing cancer genomic data from participants in Texas
- (2016) Lauren B. Becnel et al. Scientific Data
- The FAIR Guiding Principles for scientific data management and stewardship
- (2016) Mark D. Wilkinson et al. Scientific Data
- Privacy Risks from Genomic Data-Sharing Beacons
- (2015) Suyash S. Shringarpure et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Points of Truth
- (2015) Gerard J. Holzmann IEEE SOFTWARE
- A global reference for human genetic variation
- (2015) Richard A. Gibbs et al. NATURE
- Predicting effects of noncoding variants with deep learning–based sequence model
- (2015) Jian Zhou et al. NATURE METHODS
- Calling genotypes from public RNA-sequencing data enables identification of genetic variants that affect gene-expression levels
- (2015) Patrick Deelen et al. Genome Medicine
- UK Biobank: An Open Access Resource for Identifying the Causes of a Wide Range of Complex Diseases of Middle and Old Age
- (2015) Cathie Sudlow et al. PLOS MEDICINE
- Changes in Data Sharing and Data Reuse Practices and Perceptions among Scientists Worldwide
- (2015) Carol Tenopir et al. PLoS One
- Dynamic consent: a patient interface for twenty-first century research networks
- (2014) Jane Kaye et al. EUROPEAN JOURNAL OF HUMAN GENETICS
- Prognostic and Therapeutic Relevance of Molecular Subtypes in High-Grade Serous Ovarian Cancer
- (2014) Gottfried E. Konecny et al. JNCI-Journal of the National Cancer Institute
- Methylation array data can simultaneously identify individuals and convey protected health information: an unrecognized ethical concern
- (2014) Robert A Philibert et al. Clinical Epigenetics
- Reliable Identification of Genomic Variants from RNA-Seq Data
- (2013) Robert Piskol et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Data reuse and the open data citation advantage
- (2013) Heather A. Piwowar et al. PeerJ
- Bayesian method to predict individual SNP genotypes from gene expression data
- (2012) Eric E Schadt et al. NATURE GENETICS
- The 1000 Genomes Project: data management and community access
- (2012) Laura Clarke et al. NATURE METHODS
- ArrayExpress update—trends in database growth and links to data analysis tools
- (2012) Gabriella Rustici et al. NUCLEIC ACIDS RESEARCH
- NCBI GEO: archive for functional genomics data sets—update
- (2012) Tanya Barrett et al. NUCLEIC ACIDS RESEARCH
- BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata
- (2011) T. Barrett et al. NUCLEIC ACIDS RESEARCH
- Creative Commons licenses and the non-commercial condition: Implications for the re-use of biodiversity information
- (2011) Gregor Hagedorn et al. ZooKeys
- Modeling sample variables with an Experimental Factor Ontology
- (2010) James Malone et al. BIOINFORMATICS
- Predicting genetic modifier loci using functional gene networks
- (2010) I. Lee et al. GENOME RESEARCH
- Genotyping Technologies for Genetic Research
- (2009) Jiannis Ragoussis Annual Review of Genomics and Human Genetics
- Exploring the human genome with functional maps
- (2009) C. Huttenhower et al. GENOME RESEARCH
- The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants
- (2009) Peter J. A. Cock et al. NUCLEIC ACIDS RESEARCH
- Empirical Study of Data Sharing by Authors Publishing in PLoS Journals
- (2009) Caroline J. Savage et al. PLoS One
- RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
- (2008) J. C. Marioni et al. GENOME RESEARCH
- 1000 Genomes project
- (2008) Nayanah Siva NATURE BIOTECHNOLOGY
- The methylome: approaches for global DNA methylation profiling
- (2008) Stephan Beck et al. TRENDS IN GENETICS
- Resolving Individuals Contributing Trace Amounts of DNA to Highly Complex Mixtures Using High-Density SNP Genotyping Microarrays
- (2008) Nils Homer et al. PLoS Genetics
- GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function
- (2008) Sara Mostafavi et al. GENOME BIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now