Extensive signal integration by the phytohormone protein network

SMAX1/SMXL2 regulate root and root hair development downstream of KAI2-mediated signalling in Arabidopsis

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Systemic acquired resistance networks amplify airborne defense cues

(2019) Marion Wenig et al.   Nature Communications

Opposite Roles of Salicylic Acid Receptors NPR1 and NPR3/NPR4 in Transcriptional Regulation of Plant Immunity

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The BioGRID interaction database: 2019 update

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Araport11: a complete reannotation of theArabidopsis thalianareference genome

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Combinatorial interaction network of abscisic acid receptors and coreceptors fromArabidopsis thaliana

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Near-optimal probabilistic RNA-seq quantification

(2016) Nicolas L Bray et al.   NATURE BIOTECHNOLOGY

The BioGRID interaction database: 2017 update

(2016) Andrew Chatr-aryamontri et al.   NUCLEIC ACIDS RESEARCH

A high resolution map of theArabidopsis thalianadevelopmental transcriptome based on RNA-seq profiling

(2016) Anna V. Klepikova et al.   PLANT JOURNAL

An ABA-increased interaction of the PYL6 ABA receptor with MYC2 Transcription Factor: A putative link of ABA and JA signaling

(2016) Fernando Aleman et al.   Scientific Reports

Integrating data on the Arabidopsis NPR1/NPR3/NPR4 salicylic acid receptors; a differentiating argument

(2015) Xiahezi Kuai et al.   Frontiers in Plant Science

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Convergent Targeting of a Common Host Protein-Network by Pathogen Effectors from Three Kingdoms of Life

(2014) Ralf Weßling et al.   Cell Host & Microbe

A Mesoscale Abscisic Acid Hormone Interactome Reveals a Dynamic Signaling Landscape in Arabidopsis

(2014) Shelley Lumba et al.   DEVELOPMENTAL CELL

Strigolactone Hormones and Their Stereoisomers Signal through Two Related Receptor Proteins to Induce Different Physiological Responses in Arabidopsis

(2014) A. Scaffidi et al.   PLANT PHYSIOLOGY

The ABA Receptor PYL8 Promotes Lateral Root Growth by Enhancing MYB77-Dependent Transcription of Auxin-Responsive Genes

(2014) Y. Zhao et al.   Science Signaling

A Genome-Scale Resource for the Functional Characterization of Arabidopsis Transcription Factors

(2014) Jose L. Pruneda-Paz et al.   Cell Reports

The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases

(2013) Sandra Orchard et al.   NUCLEIC ACIDS RESEARCH

The Arabidopsis NIMIN proteins affect NPR1 differentially

(2013) Meike Hermann et al.   Frontiers in Plant Science

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Aminopropyltransferases Involved in Polyamine Biosynthesis Localize Preferentially in the Nucleus of Plant Cells

(2012) Borja Belda-Palazón et al.   PLoS One

Interactome mapping for analysis of complex phenotypes: Insights from benchmarking binary interaction assays

(2012) Pascal Braun   PROTEOMICS

Simple Neurite Tracer: open source software for reconstruction, visualization and analysis of neuronal processes

(2011) M. H. Longair et al.   BIOINFORMATICS

Hormone balance and abiotic stress tolerance in crop plants

(2011) Zvi Peleg et al.   CURRENT OPINION IN PLANT BIOLOGY

Quantitative analysis of dynamic protein-protein interactions in planta by a floated-leaf luciferase complementation imaging (FLuCI) assay using binary Gateway vectors

(2011) Christian Gehl et al.   PLANT JOURNAL

Evidence for Network Evolution in an Arabidopsis Interactome Map

(2011) et al.   SCIENCE

A framework integrating plant growth with hormones and nutrients

(2011) Gabriel Krouk et al.   TRENDS IN PLANT SCIENCE

Abscisic Acid: Emergence of a Core Signaling Network

(2010) Sean R. Cutler et al.   Annual Review of Plant Biology

Network medicine: a network-based approach to human disease

(2010) Albert-László Barabási et al.   NATURE REVIEWS GENETICS

AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies

(2010) Z. Jiang et al.   NUCLEIC ACIDS RESEARCH

Salicylic Acid, a Multifaceted Hormone to Combat Disease

(2009) A. Corina Vlot et al.   Annual Review of Phytopathology

An empirical framework for binary interactome mapping

(2008) Kavitha Venkatesan et al.   NATURE METHODS

An experimentally derived confidence score for binary protein-protein interactions

(2008) Pascal Braun et al.   NATURE METHODS

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

(2008) H. Yu et al.   SCIENCE