Ecological specialization and niche overlap of subterranean rodents inferred from DNA metabarcoding diet analysis

DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions

(2019) Lucie Zinger et al.   MOLECULAR ECOLOGY

Lineages of Tuco-Tucos (Ctenomyidae: Rodentia) from Midwest and Northern Brazil: Late Irradiations of Subterranean Rodents Towards the Amazon Forest

(2018) L. T. Leipnitz et al.   JOURNAL OF MAMMALIAN EVOLUTION

Can Niche Modeling and Geometric Morphometrics Document Competitive Exclusion in a Pair of Subterranean Rodents (Genus Ctenomys) with Tiny Parapatric Distributions?

(2017) Bruno B. Kubiak et al.   Scientific Reports

Body condition, diet and ecosystem function of red deer (Cervus elaphus) in a fenced nature reserve

(2017) Camilla Fløjgaard et al.   Global Ecology and Conservation

Extracellular DNA extraction is a fast, cheap and reliable alternative for multi-taxa surveys based on soil DNA

(2016) Lucie Zinger et al.   SOIL BIOLOGY & BIOCHEMISTRY

DNA metabarcoding diet analysis for species with parapatric vs sympatric distribution: a case study on subterranean rodents

(2015) C M Lopes et al.   HEREDITY

obitools: aunix-inspired software package for DNA metabarcoding

(2015) Frédéric Boyer et al.   Molecular Ecology Resources

Toward accurate molecular identification of species in complex environmental samples: testing the performance of sequence filtering and clustering methods

(2015) Jullien M. Flynn et al.   Ecology and Evolution

Highly Overlapping Winter Diet in Two Sympatric Lemming Species Revealed by DNA Metabarcoding

(2015) Eeva M. Soininen et al.   PLoS One

Sharing the Space: Distribution, Habitat Segregation and Delimitation of a New Sympatric Area of Subterranean Rodents

(2015) Bruno Busnello Kubiak et al.   PLoS One

Effects of rodents on plant cover, soil hardness, and soil nutrient content: a case study on tuco-tucos (Ctenomys minutus)

(2014) Daniel Galiano et al.   ACTA THERIOLOGICA

Using metabarcoding to ask if easily collected soil and leaf-litter samples can be used as a general biodiversity indicator

(2014) Chenxue Yang et al.   ECOLOGICAL INDICATORS

 DNA-based and geometric morphometric analysis to validate species designation: a case study of the subterranean rodent Ctenomys bicolor

(2013) J.F.B. Stolz et al.   GENETICS AND MOLECULAR RESEARCH

DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet

(2013) M. De Barba et al.   Molecular Ecology Resources

Arctic Small Rodents Have Diverse Diets and Flexible Food Selection

(2013) Eeva M. Soininen et al.   PLoS One

Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Prey Preference of Snow Leopard (Panthera uncia) in South Gobi, Mongolia

(2012) Wasim Shehzad et al.   PLoS One

Assessment of the Food Habits of the Moroccan Dorcas Gazelle in M’Sabih Talaa, West Central Morocco, Using the trnL Approach

(2012) Moulay Abdeljalil Ait Baamrane et al.   PLoS One

Subterranean Sympatry: An Investigation into Diet Using Stable Isotope Analysis

(2012) Gillian N. Robb et al.   PLoS One

Influence of management practices on large herbivore diet—Case of European bison in Białowieża Primeval Forest (Poland)

(2011) Rafał Kowalczyk et al.   FOREST ECOLOGY AND MANAGEMENT

Ecological characteristics in habitats of two African mole-rat species with different social systems in an area of sympatry: implications for the mole-rat social evolution

(2011) M. Lövy et al.   JOURNAL OF ZOOLOGY

Meta-barcoding of ‘dirt’ DNA from soil reflects vertebrate biodiversity

(2011) KENNETH ANDERSEN et al.   MOLECULAR ECOLOGY

Who is eating what: diet assessment using next generation sequencing

(2011) FRANCOIS POMPANON et al.   MOLECULAR ECOLOGY

An In silico approach for the evaluation of DNA barcodes

(2010) Gentile Ficetola et al.   BMC GENOMICS

Use of resources by the subterranean rodent Ctenomys mendocinus (Rodentia, Ctenomyidae), in the lowland Monte desert, Argentina

(2009) S. Albanese et al.   JOURNAL OF ARID ENVIRONMENTS

New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: thetrnL approach

(2009) ALICE VALENTINI et al.   Molecular Ecology Resources

Digestive strategies in the South American subterranean rodent Ctenomys talarum

(2008) Juana C. del Valle et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Diet of a fossorial rodent (Octodontidae), above-ground food availability, and changes related to cattle grazing in the Central Monte (Argentina)

(2008) M.I. Rosi et al.   JOURNAL OF ARID ENVIRONMENTS