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Title
YOC, A new strategy for pairwise alignment of collinear genomes
Authors
Keywords
Comparative genomics, Whole genome alignment, Pairwise alignment, Anchor-based strategy, Collinear fragment chaining, Bacterial genomes
Journal
BMC BIOINFORMATICS
Volume 16, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-04-03
DOI
10.1186/s12859-015-0530-3
References
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- (2009) Marie Touchon et al. PLoS Genetics
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- (2008) T. Rausch et al. BIOINFORMATICS
- Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database
- (2008) Tim Carver et al. BIOINFORMATICS
- MOSAIC: an online database dedicated to the comparative genomics of bacterial strains at the intra-species level
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- A Genomic Distance Based on MUM Indicates Discontinuity between Most Bacterial Species and Genera
- (2008) M. Deloger et al. JOURNAL OF BACTERIOLOGY
- Uncertainty in homology inferences: Assessing and improving genomic sequence alignment
- (2007) G. Lunter et al. GENOME RESEARCH
- Hardness of optimal spaced seed design
- (2007) François Nicolas et al. JOURNAL OF COMPUTER AND SYSTEM SCIENCES
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