Back to the Future: Genetically Encoded Fluorescent Proteins as Inert Tracers of the Intracellular Environment

Capturing Metabolism-Dependent Solvent Dynamics in the Lumen of a Trafficking Lysosome

(2019) Filippo Begarani et al.   ACS Nano

Nanoresolution real-time 3D orbital tracking for studying mitochondrial trafficking in vertebrate axons in vivo

(2019) Fabian Wehnekamp et al.   eLife

De novo design of a fluorescence-activating β-barrel

(2018) Jiayi Dou et al.   NATURE

Measurement of nanoscale three-dimensional diffusion in the interior of living cells by STED-FCS

(2017) Luca Lanzanò et al.   Nature Communications

Visualization of barriers and obstacles to molecular diffusion in live cells by spatial pair-cross-correlation in two dimensions

(2017) Leonel Malacrida et al.   Biomedical Optics Express

Measurement of Rapid Protein Diffusion in the Cytoplasm by Photo-Converted Intensity Profile Expansion

(2017) Rotem Gura Sadovsky et al.   Cell Reports

Spatiotemporal Fluctuation Analysis: A Powerful Tool for the Future Nanoscopy of Molecular Processes

(2016) Carmine Di Rienzo et al.   BIOPHYSICAL JOURNAL

Diffusion Tensor Analysis by Two-Dimensional Pair Correlation of Fluorescence Fluctuations in Cells

(2016) Carmine Di Rienzo et al.   BIOPHYSICAL JOURNAL

Nanometer resolution imaging and tracking of fluorescent molecules with minimal photon fluxes

(2016) Francisco Balzarotti et al.   SCIENCE

Dependence of fluorescent protein brightness on protein concentration in solution and enhancement of it

(2016) Takamitsu J. Morikawa et al.   Scientific Reports

Ultrafast, temporally stochastic STED nanoscopy of millisecond dynamics

(2015) Jale Schneider et al.   NATURE METHODS

A sensor for quantification of macromolecular crowding in living cells

(2015) Arnold J Boersma et al.   NATURE METHODS

Diffusion within the Cytoplasm: A Mesoscale Model of Interacting Macromolecules

(2014) Fabio Trovato et al.   BIOPHYSICAL JOURNAL

Genetically encoded molecular probes to visualize and perturb signaling dynamics in living biological systems

(2014) V. Sample et al.   JOURNAL OF CELL SCIENCE

Nanoscale Protein Diffusion by STED-Based Pair Correlation Analysis

(2014) Paolo Bianchini et al.   PLoS One

Coupled Protein Diffusion and Folding in the Cell

(2014) Minghao Guo et al.   PLoS One

Retrieving the intracellular topology from multi-scale protein mobility mapping in living cells

(2014) Michael Baum et al.   Nature Communications

Probing short-range protein Brownian motion in the cytoplasm of living cells

(2014) Carmine Di Rienzo et al.   Nature Communications

Rapid Measurement of Molecular Transport and Interaction inside Living Cells Using Single Plane Illumination

(2014) Per Niklas Hedde et al.   Scientific Reports

3D Orbital Tracking in a Modified Two-photon Microscope: An Application to the Tracking of Intracellular Vesicles

(2014) Andrea Anzalone et al.   Jove-Journal of Visualized Experiments

From Fast Fluorescence Imaging to Molecular Diffusion Law on Live Cell Membranes in a Commercial Microscope

(2014) Carmine Di Rienzo et al.   Jove-Journal of Visualized Experiments

Fluorescence resonance energy transfer imaging of cell signaling fromin vitrotoin vivo: Basis of biosensor construction, live imaging, and image processing

(2013) Kazuhiro Aoki et al.   DEVELOPMENT GROWTH & DIFFERENTIATION

A Minimalist Model of Protein Diffusion and Interactions: The Green Fluorescent Protein within the Cytoplasm

(2013) Fabio Trovato et al.   MACROMOLECULES

Fast spatiotemporal correlation spectroscopy to determine protein lateral diffusion laws in live cell membranes

(2013) C. Di Rienzo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Anomalous transport in the crowded world of biological cells

(2013) Felix Höfling et al.   REPORTS ON PROGRESS IN PHYSICS

Stimulated emission depletion-based raster image correlation spectroscopy reveals biomolecular dynamics in live cells

(2013) Per Niklas Hedde et al.   Nature Communications

Changes in Chromatin Compaction During the Cell Cycle Revealed by Micrometer-Scale Measurement of Molecular Flow in the Nucleus

(2012) Elizabeth Hinde et al.   BIOPHYSICAL JOURNAL

Capturing directed molecular motion in the nuclear pore complex of live cells

(2012) F. Cardarelli et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intracellular trafficking of cationic liposome–DNA complexes in living cells

(2012) Stefano Coppola et al.   Soft Matter

Fluorescence Correlation Spectroscopy of Intact Nuclear Pore Complexes

(2011) Francesco Cardarelli et al.   BIOPHYSICAL JOURNAL

The Impact of Mitotic versus Interphase Chromatin Architecture on the Molecular Flow of EGFP by Pair Correlation Analysis

(2011) Elizabeth Hinde et al.   BIOPHYSICAL JOURNAL

Spot Variation Fluorescence Correlation Spectroscopy Allows for Superresolution Chronoscopy of Confinement Times in Membranes

(2011) Verena Ruprecht et al.   BIOPHYSICAL JOURNAL

Protein Diffusion in Mammalian Cell Cytoplasm

(2011) Thomas Kühn et al.   PLoS One

Simultaneous intracellular chloride and pH measurements using a GFP-based sensor

(2010) Daniele Arosio et al.   NATURE METHODS

Measuring and imaging diffusion with multiple scan speed image correlation spectroscopy

(2010) Nadine Gröner et al.   OPTICS EXPRESS

Fluorescent Proteins and Their Applications in Imaging Living Cells and Tissues

(2010) Dmitriy M. Chudakov et al.   PHYSIOLOGICAL REVIEWS

In vivo pair correlation analysis of EGFP intranuclear diffusion reveals DNA-dependent molecular flow

(2010) E. Hinde et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

GFP: Lighting Up Life (Nobel Lecture)

(2009) Martin Chalfie   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Diffusion in Cytoplasm: Effects of Excluded Volume Due to Internal Membranes and Cytoskeletal Structures

(2009) Igor L. Novak et al.   BIOPHYSICAL JOURNAL

Imaging Barriers to Diffusion by Pair Correlation Functions

(2009) Michelle A. Digman et al.   BIOPHYSICAL JOURNAL

Fluorescent proteins for live cell imaging: Opportunities, limitations, and challenges

(2009) Jörg Wiedenmann et al.   IUBMB LIFE

Single Amino Acid Replacement Makes Aequorea victoria Fluorescent Proteins Reversibly Photoswitchable

(2009) Ranieri Bizzarri et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Mapping eGFP Oligomer Mobility in Living Cell Nuclei

(2009) Nicolas Dross et al.   PLoS One

Green fluorescent protein based pH indicators for in vivo use: a review

(2008) Ranieri Bizzarri et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

A New FRAP/FRAPa Method for Three-Dimensional Diffusion Measurements Based on Multiphoton Excitation Microscopy

(2008) Davide Mazza et al.   BIOPHYSICAL JOURNAL

Direct observation of the nanoscale dynamics of membrane lipids in a living cell

(2008) Christian Eggeling et al.   NATURE