Basal‐like and classical cells coexist in pancreatic cancer revealed by single‐cell analysis on biopsy‐derived pancreatic cancer organoids from the classical subtype

Unsupervised class discovery in pancreatic ductal adenocarcinoma reveals cell-intrinsic mesenchymal features and high concordance between existing classification systems

(2020) Frederike Dijk et al.   Scientific Reports

Molecular subtypes of pancreatic cancer

(2019) Eric A. Collisson et al.   Nature Reviews Gastroenterology & Hepatology

The single-cell transcriptional landscape of mammalian organogenesis

(2019) Junyue Cao et al.   NATURE

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(2019) Hervé Tiriac et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Mitophagy in Cancer: A Tale of Adaptation

(2019) Vara-Perez et al.   Cells

Single-cell RNA-seq highlights intra-tumoral heterogeneity and malignant progression in pancreatic ductal adenocarcinoma

(2019) Junya Peng et al.   CELL RESEARCH

NEAT1 promotes colon cancer progression through sponging miR‐495‐3p and activating CDK6 in vitro and in vivo

(2019) Zhiyun He et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Cancer modeling meets human organoid technology

(2019) David Tuveson et al.   SCIENCE

Purity Independent Subtyping of Tumors (PurIST), A Clinically Robust, Single-sample Classifier for Tumor Subtyping in Pancreatic Cancer

(2019) Naim U. Rashid et al.   CLINICAL CANCER RESEARCH

Emerging epigenomic landscapes of pancreatic cancer in the era of precision medicine

(2019) Gwen Lomberk et al.   Nature Communications

Cancer statistics, 2018

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Regulation of anti-tumor miR-144-5p targets oncogenes: direct regulation of syndecan-3 and its clinical significance

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Integrating single-cell transcriptomic data across different conditions, technologies, and species

(2018) Andrew Butler et al.   NATURE BIOTECHNOLOGY

Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding

(2018) Alexander B. Rosenberg et al.   SCIENCE

zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs

(2018) Swati Parekh et al.   GigaScience

High-throughput single-cell transcriptomics on organoids

(2018) Agnieska Brazovskaja et al.   CURRENT OPINION IN BIOTECHNOLOGY

Reversed graph embedding resolves complex single-cell trajectories

(2017) Xiaojie Qiu et al.   NATURE METHODS

Comprehensive single-cell transcriptional profiling of a multicellular organism

(2017) Junyue Cao et al.   SCIENCE

Cell matrix adhesions in cancer: The proteins that form the glue

(2017) Mazvita Maziveyi et al.   Oncotarget

Pancreatic Adenocarcinoma Therapeutic Targets Revealed by Tumor-Stroma Cross-Talk Analyses in Patient-Derived Xenografts

(2017) Rémy Nicolle et al.   Cell Reports

Genomic analyses identify molecular subtypes of pancreatic cancer

(2016) Peter Bailey et al.   NATURE

Complement inhibitor CSMD1 acts as tumor suppressor in human breast cancer

(2016) Astrid Escudero-Esparza et al.   Oncotarget

Aberrant NEAT1 expression is associated with clinical outcome in high grade glioma patients

(2015) Chengbiao He et al.   APMIS

Organoid Models of Human and Mouse Ductal Pancreatic Cancer

(2015) Sylvia F. Boj et al.   CELL

Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells

(2015) Allon M. Klein et al.   CELL

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

(2015) Evan Z. Macosko et al.   CELL

Virtual microdissection identifies distinct tumor- and stroma-specific subtypes of pancreatic ductal adenocarcinoma

(2015) Richard A Moffitt et al.   NATURE GENETICS

NEAT expression is associated with tumor recurrence and unfavorable prognosis in colorectal cancer

(2015) Yunlong Li et al.   Oncotarget

Targeting PI3K/Akt/mTOR Signaling in Cancer

(2014) Camillo Porta et al.   Frontiers in Oncology

Smart-seq2 for sensitive full-length transcriptome profiling in single cells

(2013) Simone Picelli et al.   NATURE METHODS

Evolution and dynamics of pancreatic cancer progression

(2013) S Yachida et al.   ONCOGENE

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Vimentin in cancer and its potential as a molecular target for cancer therapy

(2011) Arun Satelli et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Biomarkers for epithelial-mesenchymal transitions

(2009) Michael Zeisberg et al.   JOURNAL OF CLINICAL INVESTIGATION