Review
Cell Biology
Hunter J. Hill, Kent G. Golic
Summary: This article reviews the studies on centromere strength over the past 70 years, with a special focus on the characterization of Drosophila melanogaster kinetochores, in order to determine if the current evidence supports the previous conclusions.
Article
Plant Sciences
Raheleh Karimi-Ashtiyani, Veit Schubert, Andreas Houben
Summary: Our study shows that only the rye-derived centromere part in the wheat-rye 1BL/1RS translocation chromosome incorporates wheat CENH3, supporting the idea that one centromere part undergoes inactivation in a translocated chromosome to maintain chromosome stability.
FRONTIERS IN PLANT SCIENCE
(2021)
Review
Biochemistry & Molecular Biology
Martin A. Lysak
Summary: The evolution of eukaryotic genomes involves fluctuations in chromosome number, with cycles of increase and decrease in chromosome number. Chromosome fusions result from DNA recombination between nonhomologous chromosomes. End-to-end chromosome fusions and nested chromosome fusions have played a more significant role in the evolution of eukaryotic genomes than previously thought. This review summarizes the limited knowledge on the origin, frequency, and evolutionary implications of these fusion events in eukaryotes, with a focus on land plants. The potential importance of interactions between nonhomologous chromosomes and chromosome pairing during meiosis in the origin of these fusions is discussed.
Article
Plant Sciences
Qinghua Shi, Xianrui Guo, Handong Su, Yingxin Zhang, Zanmin Hu, Jing Zhang, Fangpu Han
Summary: In this study, researchers found that the induced tetraploid Th. elongatum and the natural tetraploid Th. elongatum are morphologically similar, except for slower development and lower seed setting in the induced tetraploid. Using various molecular probes, the researchers identified differences between two chromosome sets of the natural tetraploid Th. elongatum, but not the induced one. Analysis of hybrid individuals and meiosis in the induced tetraploid revealed that chromosome pairing was successful, indicating rapid diploidization in the induced tetraploid.
Article
Plant Sciences
Yang Liu, Chunhui Wang, Handong Su, James A. Birchler, Fangpu Han
Summary: Haspin regulates chromosomal localization and segregation in both human and plant cells through H3T3 phosphorylation, with slightly different roles observed in mitosis and meiosis in plants. Plant Haspin lacks motifs necessary for binding to specific proteins involved in cohesion, leading to distinct mechanisms of action compared to animals.
JOURNAL OF EXPERIMENTAL BOTANY
(2021)
Article
Genetics & Heredity
Na Wang, Jianing Liu, William A. Ricci, Jonathan Gent, R. Kelly Dawe
Summary: The research reveals a positive relationship between centromere size and genome size, independent of variations in major centromeric satellite sequences. Additionally, changes in centromere size involve alterations in bound CENH3, but overexpressing CENH3 does not mimic this effect. The study demonstrates that centromere size is among the scalable features affected by multiple limiting factors.
Article
Oncology
Melissa C. Keinath, Asya Davidian, Vladimir Timoshevskiy, Nataliya Timoshevskaya, Joseph G. Gall
Summary: This study identified 9 lampbrush chromosomes in the oocytes of the Mexican axolotl using RNAseq and BAC probes, and developed a centromere probe that localizes to all 14 centromeres. The measurement of relative LBC arm lengths and RNA polymerase III localization patterns enabled the identification of all LBCs. The data from this study will facilitate a more detailed transcription analysis of individual LBC loops.
EXPERIMENTAL CELL RESEARCH
(2021)
Article
Biochemistry & Molecular Biology
Ryan N. Douglas, Hua Yang, Bing Zhang, Chen Chen, Fangpu Han, Jianlin Cheng, James A. Birchler
Summary: Research on maize B chromosomes shows that they undergo nondisjunction during the second pollen mitosis as part of their accumulation mechanism. The study identified 9-Bic-1 as an epigenetically silenced B chromosome centromere that may undergo both centromere reactivation and de novo centromere formation. Breakpoint determination revealed the potential for these processes to occur on fragments derived from the progenitor.
CHROMOSOME RESEARCH
(2021)
Article
Plant Sciences
Qinzheng Zhao, Ya Meng, Panqiao Wang, Xiaodong Qin, Chunyan Cheng, Junguo Zhou, Xiaqing Yu, Ji Li, Qunfeng Lou, Molly Jahn, Jinfeng Chen
Summary: A new method was developed to rapidly and accurately represent karyotypes of Cucumis species, revealing that African and Asian origin species underwent large-scale genomic reshuffling during evolution.
Article
Biotechnology & Applied Microbiology
Lingzhan Xue, Yu Gao, Meiying Wu, Tian Tian, Haiping Fan, Yongji Huang, Zhen Huang, Dapeng Li, Luohao Xu
Summary: The study on the haplotype-resolved genome assembly of zig-zag eel sheds light on the evolution of sex chromosomes and recombination suppression mechanisms, revealing a similar sex-linked region on the X and Y chromosomes and identifying a potential sex-determining gene in the SLR.
Article
Biochemistry & Molecular Biology
Gang Liu
Summary: In order to achieve rapid response, effective control, and protection of life in large-scale radiation events, the IAEA Manual 2011 has been revised based on data of radio-sensitivity and dose-rate. The authors conducted experiments and found significant individual differences in radio-sensitivity. They also established a quadratic linear relationship between (dicentric chromosome + centric rings)/cell and dose rate. They recommend creating a Unity Standard Curve of Biological Dose for a joint and rapid response to nuclear and radiological accidents.
Review
Oncology
Flavia G. Ghiraldini, Dan Filipescu, Emily Bernstein
Summary: Cancer is a complex disease characterized by loss of cellular homeostasis due to genetic and epigenetic alterations. Histone variants play critical roles in processes like maintenance of genome integrity, nuclear architecture, and cell identity. Cancer cells hijack histone variants and their chaperones to disrupt homeostasis, which is emerging as a common strategy across various cancers, especially solid tumors.
NATURE REVIEWS CANCER
(2021)
Article
Genetics & Heredity
Diana Cook, Sarah Long, John Stanton, Patrick Cusick, Colleen Lawrimore, Elaine Yeh, Sarah Grant, Kerry Bloom
Summary: The study revealed that the pericentromere region of chromosomes is a site of confined biochemical activities, and the repair of chromosome breaks varies depending on the distance and position between centromeres. Different repair pathways are utilized for breaks in the pericentromeric chromatin versus breaks in the arms of chromosomes, indicating spatial control over DNA repair pathways in different nuclear regions.
Article
Plant Sciences
Suzuka Kikuchi, Takuya Sakamoto, Sachihiro Matsunaga, Akitoshi Iwamoto
Summary: Whole-mount fluorescent in situ hybridization (WM-FISH) is a useful technique for studying chromosome behavior in tissues or organs. However, it is challenging to obtain precise spatial information in roots due to the damage caused during processing. In this study, a new approach was developed to perform WM-FISH on intact roots of Arabidopsis thaliana, allowing for accurate analysis of nuclear size and centromere signals. The method involved direct hybridization on MAS-coated glass slides and optimized enzyme treatment conditions. 3D data processing was utilized to quantify parameters and determine spatial profiles.
JOURNAL OF PLANT RESEARCH
(2023)
Article
Genetics & Heredity
Renata Flavia Carvalho, Margarida Lopes Rodrigues Aguiar-Perecin, Wellington Ronildo Clarindo, Roberto Fristche-Neto, Mateus Mondin
Summary: Research has found that maize flowering time is associated with variations in genome size and heterochromatic knob content, although knob composition does not affect genome size and flowering time. A knob marker on chromosome 9 was identified as having the strongest association with flowering time.
FRONTIERS IN GENETICS
(2022)
Article
Biochemistry & Molecular Biology
Shu-Fen Peng, Hung-Kun Hsu, Chun-Cheng Lin, Ya-Ming Cheng, Kuang-Hsing Hsu
Article
Plant Sciences
Ying Chun Chen, Yang Jung Huang, Chiu Mei Wang, Chin An Chiu, Huey Ling Lin, Pei Fang Lee, Ya Ming Cheng, Chen Chang
Article
Biochemistry & Molecular Biology
Huan-Zhi Lin, Wei-De Lin, Chien-Yu Lin, Shu-Fen Peng, Ya-Ming Cheng
Article
Biochemistry & Molecular Biology
Ya-Ming Cheng
CHROMOSOME RESEARCH
(2010)
Article
Biochemistry & Molecular Biology
Shu-Fen Peng, Ya-Ming Cheng
CHROMOSOME RESEARCH
(2011)
Article
Cell Biology
Yu-Lun Chien, Chien-Yu Lin, Kuan-Lin Lo, Ya-Ming Cheng
CYTOGENETIC AND GENOME RESEARCH
(2014)
Article
Agriculture, Multidisciplinary
Tzu Che Lin, Mau Shing Yeh, Ya Ming Cheng, Li Chang Lin, Jih Min Sung
JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE
(2012)
Article
Biochemistry & Molecular Biology
Kuo-Wei Kao, Chien-Yu Lin, Shu-Fen Peng, Ya-Ming Cheng
MOLECULAR GENETICS AND GENOMICS
(2015)
Article
Biochemistry & Molecular Biology
Hung-Kun Hsu, Kuang-Hsing Hsu, Ya-Ming Cheng, Hao-Yi Suen, Shu-Fen Peng
Article
Biochemistry & Molecular Biology
Yen-Hua Huang, Shu-Fen Peng, Yao-Pin Lin, Ya-Ming Cheng
CHROMOSOME RESEARCH
(2020)
Article
Biochemistry & Molecular Biology
Zi-Jie Hong, Jun-Xiang Xiao, Shu-Fen Peng, Yao-Pin Lin, Ya-Ming Cheng
MOLECULAR GENETICS AND GENOMICS
(2020)
Article
Biochemistry & Molecular Biology
Shih-Hsuan Tseng, Shu-Fen Peng, Ya-Ming Cheng
CHROMOSOME RESEARCH
(2018)
Article
Zoology
Lei-Jiau Hsieh, Ya-Ming Cheng, Yi-Chun Wang, Chyi-Chyang Lin, Yueh-Chun Li
ZOOLOGICAL STUDIES
(2014)
Article
Agronomy
H. H. Wang, B. J. Chen, L. M. Hsu, Y. M. Cheng, Y. J. Liou, C. Y. Wang
ALLELOPATHY JOURNAL
(2011)