Two main genetic clusters with high admixture between forest and cultivated chestnut (Castanea sativa Mill.) in France

Revising the sweet chestnut (Castanea sativa Mill.) refugia history of the last glacial period with extended pollen and macrofossil evidence

(2019) Patrik Krebs et al.   QUATERNARY SCIENCE REVIEWS

Mediterranean and Northern Iberian gene pools of wild Castanea sativa Mill. are two differentiated ecotypes originated under natural divergent selection

(2019) B. Míguez-Soto et al.   PLoS One

Glacial refugia and mid-Holocene expansion delineate the current distribution of Castanea sativa in Europe

(2018) José V. Roces-Díaz et al.   PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY

Instant domestication process of European chestnut cultivars

(2018) Santiago Pereira-Lorenzo et al.   ANNALS OF APPLIED BIOLOGY

Genetic structure and diversity of European chestnut (Castanea sativa Mill.) populations in western Balkans: On a crossroad between east and west

(2017) Azra Skender et al.   Genetika-Belgrade

The computer program structure for assigning individuals to populations: easy to use but easier to misuse

(2017) Jinliang Wang   Molecular Ecology Resources

Database of European chestnut cultivars and definition of a core collection using simple sequence repeats

(2017) Santiago Pereira-Lorenzo et al.   Tree Genetics & Genomes

Landscape genetics structure of European sweet chestnut (Castanea sativa Mill): indications for conservation priorities

(2017) Claudia Mattioni et al.   Tree Genetics & Genomes

Genetic structure of wild sweet chestnut (Castanea sativa Mill.) populations in northwest of Spain and their differences with other European stands

(2016) J. Fernández-Cruz et al.   CONSERVATION GENETICS

The programstructuredoes not reliably recover the correct population structure when sampling is uneven: subsampling and new estimators alleviate the problem

(2016) Sebastien J. Puechmaille   Molecular Ecology Resources

Genetic Diversity, Population Structure, Parentage Analysis, and Construction of Core Collections in the French Apple Germplasm Based on SSR Markers

(2016) Ludivine Lassois et al.   PLANT MOLECULAR BIOLOGY REPORTER

What does research reproducibility mean?

(2016) Steven N. Goodman et al.   Science Translational Medicine

Identification of traditional Galician sweet chestnut varieties using ethnographic and nuclear microsatellite data

(2015) J. Fernández-López et al.   Tree Genetics & Genomes

Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality

(2015) Zhian N. Kamvar et al.   Frontiers in Genetics

Fast and Efficient Estimation of Individual Ancestry Coefficients

(2014) Eric Frichot et al.   GENETICS

Genetic characterization of chestnut (Castanea sativa Mill.) orchards and traditional nut varieties in El Bierzo, a glacial refuge and major cultivation site in northwestern Spain

(2014) Julia Quintana et al.   Tree Genetics & Genomes

PopGenReport: simplifying basic population genetic analyses in R

(2014) Aaron T. Adamack et al.   Methods in Ecology and Evolution

Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction

(2014) Zhian N. Kamvar et al.   PeerJ

Microsatellite markers reveal a strong geographical structure in European populations of Castanea sativa (Fagaceae): Evidence for multiple glacial refugia

(2013) C. Mattioni et al.   AMERICAN JOURNAL OF BOTANY

Estimating the genetic diversity and spatial structure of Bulgarian Castanea sativa populations by SSRs: implications for conservation

(2013) Ilaria Lusini et al.   CONSERVATION GENETICS

Identification and characterization of ancient Italian chestnut using nuclear microsatellite markers

(2013) Deborah Beghè et al.   SCIENTIA HORTICULTURAE

Resilience of Sweet Chestnut and Truffle Holm-Oak Rural Forests in Languedoc-Roussillon, France: Roles of Social-Ecological Legacies, Domestication, and Innovations

(2012) Yildiz Aumeeruddy-Thomas et al.   ECOLOGY AND SOCIETY

Castanea spp. biodiversity conservation: collection and characterization of the genetic diversity of an endangered species

(2012) M. G. Mellano et al.   GENETIC RESOURCES AND CROP EVOLUTION

Current trends in microsatellite genotyping

(2011) E. GUICHOUX et al.   Molecular Ecology Resources

Genetic characterisation of traditional chestnut varieties in Italy using microsatellites (simple sequence repeats) markers

(2010) M.A. Martín et al.   ANNALS OF APPLIED BIOLOGY

pegas: an R package for population genetics with an integrated-modular approach

(2010) E. Paradis   BIOINFORMATICS

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

The computer program STRUCTURE does not reliably identify the main genetic clusters within species: simulations and implications for human population structure

(2010) S T Kalinowski   HEREDITY

The SSR-based molecular profile of 1005 grapevine (Vitis vinifera L.) accessions uncovers new synonymy and parentages, and reveals a large admixture amongst varieties of different geographic origin

(2010) Guido Cipriani et al.   THEORETICAL AND APPLIED GENETICS

Genetic diversity in European chestnut populations by means of genomic and genic microsatellite markers

(2010) M. Angela Martin et al.   Tree Genetics & Genomes

Variation in grafted European chestnut and hybrids by microsatellites reveals two main origins in the Iberian Peninsula

(2010) Santiago Pereira-Lorenzo et al.   Tree Genetics & Genomes

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

GSTand its relatives do not measure differentiation

(2008) LOU JOST   MOLECULAR ECOLOGY

Role of domestication in shaping Castanea sativa genetic variation in Europe

(2008) Claudia Mattioni et al.   Tree Genetics & Genomes