Parallel selection on thermal physiology facilitates repeated adaptation of city lizards to urban heat islands

Linking locomotor performance to morphological shifts in urban lizards

(2018) Kristin M. Winchell et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Evolution of thermal tolerance and its fitness consequences: parallel and non-parallel responses to urban heat islands across three cities

(2018) Sarah E. Diamond et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas

(2017) Stephen E. Fick et al.   INTERNATIONAL JOURNAL OF CLIMATOLOGY

Signatures of positive selection and local adaptation to urbanization in white-footed mice (Peromyscus leucopus )

(2017) Stephen E. Harris et al.   MOLECULAR ECOLOGY

Evolution of life in urban environments

(2017) Marc T. J. Johnson et al.   SCIENCE

Phenotypic shifts in urban areas in the tropical lizardAnolis cristatellus

(2016) Kristin M. Winchell et al.   EVOLUTION

Cityscape genetics: structural vs. functional connectivity of an urban lizard population

(2016) Joscha Beninde et al.   MOLECULAR ECOLOGY

Nucleic Acids Research

(2016)   NUCLEIC ACIDS RESEARCH

Eco-evolutionary dynamics in urbanized landscapes: evolution, species sorting and the change in zooplankton body size along urbanization gradients

(2016) Kristien I. Brans et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Evaluating ‘Plasticity-First’ Evolution in Nature: Key Criteria and Empirical Approaches

(2016) Nicholas A. Levis et al.   TRENDS IN ECOLOGY & EVOLUTION

Variation at the DRD4 locus is associated with wariness and local site selection in urban black swans

(2015) Wouter F.D. van Dongen et al.   BMC EVOLUTIONARY BIOLOGY

Assembly of Multi-tRNA Synthetase Complex via Heterotetrameric Glutathione Transferase-homology Domains

(2015) Ha Yeon Cho et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

PredictProtein—an open resource for online prediction of protein structural and functional features

(2014) Guy Yachdav et al.   NUCLEIC ACIDS RESEARCH

Evolutionary stasis and lability in thermal physiology in a group of tropical lizards

(2014) M. M. Munoz et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Urbanization and its effects on personality traits: a result of microevolution or phenotypic plasticity?

(2013) Ana Catarina Miranda et al.   GLOBAL CHANGE BIOLOGY

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Urban landscape genetics: canopy cover predicts gene flow between white-footed mouse (Peromyscus leucopus) populations in New York City

(2012) JASON MUNSHI-SOUTH   MOLECULAR ECOLOGY

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

adegenet 1.3-1: new tools for the analysis of genome-wide SNP data

(2011) Thibaut Jombart et al.   BIOINFORMATICS

The genome of the green anole lizard and a comparative analysis with birds and mammals

(2011) Jessica Alföldi et al.   NATURE

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Survival from Hypoxia in C. elegans by Inactivation of Aminoacyl-tRNA Synthetases

(2009) L. L. Anderson et al.   SCIENCE

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

EVOLUTION ON A LOCAL SCALE: DEVELOPMENTAL, FUNCTIONAL, AND GENETIC BASES OF DIVERGENCE IN BILL FORM AND ASSOCIATED CHANGES IN SONG STRUCTURE BETWEEN ADJACENT HABITATS

(2008) Alexander V. Badyaev et al.   EVOLUTION