The genome of jojoba (Simmondsia chinensis): A taxonomically isolated species that directs wax ester accumulation in its seeds

Tissue-specific differences in metabolites and transcripts contribute to the heterogeneity of ricinoleic acid accumulation in Ricinus communis L. (castor) seeds

(2019) Drew Sturtevant et al.   Metabolomics

Spatial analysis of lipid metabolites and expressed genes reveals tissue-specific heterogeneity of lipid metabolism in high- and low-oil Brassica napus L. seeds

(2018) Shaoping Lu et al.   PLANT JOURNAL

The Gastrodia elata genome provides insights into plant adaptation to heterotrophy

(2018) Yuan Yuan et al.   Nature Communications

Production of wax esters in the wild oil species Lepidium campestre

(2017) Emelie Ivarson et al.   INDUSTRIAL CROPS AND PRODUCTS

A functional imaging study of germinating oilseed rape seed

(2017) Eberhard Munz et al.   NEW PHYTOLOGIST

Tailoring the composition of novel wax esters in the seeds of transgenic Camelina sativa through systematic metabolic engineering

(2017) Noemi Ruiz-Lopez et al.   PLANT BIOTECHNOLOGY JOURNAL

Two Acyltransferases Contribute Differently to Linolenic Acid Levels in Seed Oil

(2017) Sofia Marmon et al.   PLANT PHYSIOLOGY

Spatial and Temporal Mapping of Key Lipid Species inBrassica napusSeeds

(2017) Helen K. Woodfield et al.   PLANT PHYSIOLOGY

LTR_retriever: A Highly Accurate and Sensitive Program for Identification of Long Terminal Repeat Retrotransposons

(2017) Shujun Ou et al.   PLANT PHYSIOLOGY

De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds

(2017) Olga Dudchenko et al.   SCIENCE

Turning Over a New Leaf in Lipid Droplet Biology

(2017) Michal Pyc et al.   TRENDS IN PLANT SCIENCE

An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV

(2016)   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

Matrix assisted laser desorption/ionization-mass spectrometry imaging (MALDI-MSI) for direct visualization of plant metabolites in situ

(2016) Drew Sturtevant et al.   CURRENT OPINION IN BIOTECHNOLOGY

Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees

(2016) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Lipid Droplet-Associated Proteins (LDAPs) Are Required for the Dynamic Regulation of Neutral Lipid Compartmentation in Plant Cells

(2016) Satinder K. Gidda et al.   PLANT PHYSIOLOGY

Lipid metabolites in seeds of diverse Gossypium accessions: molecular identification of a high oleic mutant allele

(2016) Drew Sturtevant et al.   PLANTA

Dedicated Industrial Oilseed Crops as Metabolic Engineering Platforms for Sustainable Industrial Feedstock Production

(2016) Li-Hua Zhu et al.   Scientific Reports

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Progress, challenges and the future of crop genomes

(2015) Todd P Michael et al.   CURRENT OPINION IN PLANT BIOLOGY

Synthesis of oleyl oleate wax esters in Arabidopsis thaliana and Camelina sativa seed oil

(2015) Tim Iven et al.   PLANT BIOTECHNOLOGY JOURNAL

Arabidopsis SEIPIN Proteins Modulate Triacylglycerol Accumulation and Influence Lipid Droplet Proliferation

(2015) Yingqi Cai et al.   PLANT CELL

An enhanced plant lipidomics method based on multiplexed liquid chromatography-mass spectrometry reveals additional insights into cold- and drought-induced membrane remodeling

(2015) Pablo Tarazona et al.   PLANT JOURNAL

Hevea brasiliensis REF (Hev b 1) and SRPP (Hev b 3): An overview on rubber particle proteins

(2014) Karine Berthelot et al.   BIOCHIMIE

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

(2014) Bruce J. Walker et al.   PLoS One

Modified oleic cottonseeds show altered content, composition and tissue-specific distribution of triacylglycerol molecular species

(2013) Patrick J. Horn et al.   BIOCHIMIE

Metabolite Imager: customized spatial analysis of metabolite distributions in mass spectrometry imaging

(2013) Patrick J. Horn et al.   Metabolomics

The Norway spruce genome sequence and conifer genome evolution

(2013) Björn Nystedt et al.   NATURE

Architecture and evolution of a minute plant genome

(2013) Enrique Ibarra-Laclette et al.   NATURE

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

(2013) Ignazio Verde et al.   NATURE GENETICS

Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions

(2013) Jaina Mistry et al.   NUCLEIC ACIDS RESEARCH

Wax ester profiling of seed oil by nano-electrospray ionization tandem mass spectrometry

(2013) Tim Iven et al.   Plant Methods

Identification of a New Class of Lipid Droplet-Associated Proteins in Plants

(2013) P. J. Horn et al.   PLANT PHYSIOLOGY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Spatial Mapping of Lipids at Cellular Resolution in Embryos of Cotton

(2012) P. J. Horn et al.   PLANT CELL

Advances in plant genome sequencing

(2012) John P. Hamilton et al.   PLANT JOURNAL

Current challenges in de novo plant genome sequencing and assembly

(2012) Michael C Schatz et al.   GENOME BIOLOGY

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

(2011) Guillaume Marçais et al.   BIOINFORMATICS

Wound healing properties of jojoba liquid wax: An in vitro study

(2011) Elia Ranzato et al.   JOURNAL OF ETHNOPHARMACOLOGY

The genome of Theobroma cacao

(2010) Xavier Argout et al.   NATURE GENETICS

The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana

(2010) S. Ossowski et al.   SCIENCE

KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies

(2010) Dapeng Wang et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons

(2008) David Ellinghaus et al.   BMC BIOINFORMATICS

Synteny and Collinearity in Plant Genomes

(2008) H. Tang et al.   SCIENCE

Evaluation of additive effects of hydrolyzed jojoba (Simmondsia chinensis) esters and glycerol: a preliminary study

(2008) Jaimi Meyer et al.   Journal of Cosmetic Dermatology

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

(2008) Brian J Haas et al.   GENOME BIOLOGY