Prevalence and Characteristics of Extended-Spectrum-β-Lactamase-Producing and Carbapenemase-Producing Enterobacteriaceae from Freshwater Fish and Pork in Wet Markets of Hong Kong

The nature and epidemiology of OqxAB, a multidrug efflux pump

(2019) Jun Li et al.   Antimicrobial Resistance and Infection Control

IncX3 Epidemic Plasmid Carrying bla NDM-5 in Escherichia coli from Swine in Multiple Geographic Areas in China

(2018) Pak-Leung Ho et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Carbapenem-resistant Enterobacteriaceae in wildlife, food-producing, and companion animals: a systematic review

(2018) R. Köck et al.   CLINICAL MICROBIOLOGY AND INFECTION

The widespread dissemination of integrons throughout bacterial communities in a riverine system

(2018) Gregory C. A. Amos et al.   ISME Journal

Genome Sequencing of Extended-Spectrum β-Lactamase (ESBL)-Producing Klebsiella pneumoniae Isolated from Pigs and Abattoir Workers in Cameroon

(2018) Luria L. Founou et al.   Frontiers in Microbiology

Characterizing Mobilized Virulence Factors and Multidrug Resistance Genes in Carbapenemase-Producing Klebsiella pneumoniae in a Sri Lankan Hospital

(2018) Chendi Zhu et al.   Frontiers in Microbiology

VFDB 2019: a comparative pathogenomic platform with an interactive web interface

(2018) Bo Liu et al.   NUCLEIC ACIDS RESEARCH

VIM-1 carbapenemase-producing Escherichia coli isolated from retail seafood, Germany 2016

(2017) Nicole Roschanski et al.   Eurosurveillance

Prevalence of extended-spectrum β-lactamase producing Escherichia coli in seafood from the retail fishery outlets of Veraval, Gujarat, India

(2017) G.K. Sivaraman et al.   JOURNAL OF ENVIRONMENTAL BIOLOGY

Carbapenemase-producing Enterobacteriaceae recovered from the environment of a swine farrow-to-finish operation in the United States

(2016) Dixie F. Mollenkopf et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data

(2016) Jaime Huerta-Cepas et al.   MOLECULAR BIOLOGY AND EVOLUTION

Roary: rapid large-scale prokaryote pan genome analysis

(2015) Andrew J. Page et al.   BIOINFORMATICS

Carbapenemase Producing Bacteria in the Food Supply Escaping Detection

(2015) Beverly J. Morrison et al.   PLoS One

The Carbapenem Inactivation Method (CIM), a Simple and Low-Cost Alternative for the Carba NP Test to Assess Phenotypic Carbapenemase Activity in Gram-Negative Rods

(2015) Kim van der Zwaluw et al.   PLoS One

In SilicoDetection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing

(2014) Alessandra Carattoli et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Characterization of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli obtained from Danish pigs, pig farmers and their families from farms with high or no consumption of third- or fourth-generation cephalosporins

(2014) Anette M. Hammerum et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Development and evaluation of a novel universal β-lactamase gene subtyping assay for blaSHV, blaTEM and blaCTX-M using clinical and livestock-associated Escherichia coli

(2014) Lena Marie Strauß et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Carbapenemase-producing bacteria in companion animals: a public health concern on the horizon

(2014) S. Abraham et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

PMQR genes oqxAB and aac(6′)Ib-cr accelerate the development of fluoroquinolone resistance in Salmonella typhimurium

(2014) Marcus H. Wong et al.   Frontiers in Microbiology

Carbapenem-resistant Gram-negative bacilli in Canada 2009-10: results from the Canadian Nosocomial Infection Surveillance Program (CNISP)

(2012) L. F. Mataseje et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Prevalence and characteristics of  -lactamase and plasmid-mediated quinolone resistance genes in Escherichia coli isolated from farmed fish in China

(2012) H.-X. Jiang et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Identification of acquired antimicrobial resistance genes

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Comparison of Four Chromogenic Culture Media for Carbapenemase-Producing Enterobacteriaceae

(2012) K. M. Wilkinson et al.   JOURNAL OF CLINICAL MICROBIOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

BIGSdb: Scalable analysis of bacterial genome variation at the population level

(2011) Keith A Jolley et al.   BMC BIOINFORMATICS

Extensive dissemination of CTX-M-producing Escherichia coli with multidrug resistance to 'critically important' antibiotics among food animals in Hong Kong, 2008-10

(2011) P. L. Ho et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Genetic Characterization of Extended-Spectrum Beta-Lactamases in Escherichia coli Isolates of Pigs from a Portuguese Intensive Swine Farm

(2010) Alexandre Gonçalves et al.   Foodborne Pathogens and Disease

Molecular Analysis of Antimicrobial Resistance in Gram-Negative Bacteria Isolated from Fish Farms in Egypt

(2010) Yojiro ISHIDA et al.   JOURNAL OF VETERINARY MEDICAL SCIENCE