Robust Monte-Carlo Simulations in Diffusion-MRI: Effect of the Substrate Complexity and Parameter Choice on the Reproducibility of Results

Time‐dependent diffusion in undulating thin fibers: Impact on axon diameter estimation

(2019) Jan Brabec et al.   NMR IN BIOMEDICINE

Towards microstructure fingerprinting: Estimation of tissue properties from a dictionary of Monte Carlo diffusion MRI simulations

(2018) Gaëtan Rensonnet et al.   NEUROIMAGE

Assessing the validity of the approximation of diffusion-weighted-MRI signals from crossing fascicles by sums of signals from single fascicles

(2017) Gaëtan Rensonnet et al.   MAGNETIC RESONANCE IN MEDICINE

White matter microstructure from nonparametric axon diameter distribution mapping

(2016) Dan Benjamini et al.   NEUROIMAGE

Including diffusion time dependence in the extra-axonal space improves in vivo estimates of axonal diameter and density in human white matter

(2016) Silvia De Santis et al.   NEUROIMAGE

COMMIT: Convex Optimization Modeling for Microstructure Informed Tractography

(2015) Alessandro Daducci et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Simulation of changes in diffusion related to different pathologies at cellular level after traumatic brain injury

(2015) Mu Lin et al.   MAGNETIC RESONANCE IN MEDICINE

White matter compartment models for in vivo diffusion MRI at 300 mT/m

(2015) Uran Ferizi et al.   NEUROIMAGE

Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data

(2015) Alessandro Daducci et al.   NEUROIMAGE

Mesoscopic structure of neuronal tracts from time-dependent diffusion

(2015) Lauren M. Burcaw et al.   NEUROIMAGE

Dipy, a library for the analysis of diffusion MRI data

(2015) Eleftherios Garyfallidis et al.   Frontiers in Neuroinformatics

Accelerated Changes in White Matter Microstructure during Aging: A Longitudinal Diffusion Tensor Imaging Study

(2014) C. E. Sexton et al.   JOURNAL OF NEUROSCIENCE

Monte Carlo simulation with fixed steplength for diffusion processes in nonhomogeneous media

(2013) V. Ruiz Barlett et al.   JOURNAL OF COMPUTATIONAL PHYSICS

The role of tissue microstructure and water exchange in biophysical modelling of diffusion in white matter

(2013) Markus Nilsson et al.   MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE

A computational model for diffusion weighted imaging of myelinated white matter

(2013) Gregory T. Baxter et al.   NEUROIMAGE

Diffusion Microscopist Simulator: A General Monte Carlo Simulation System for Diffusion Magnetic Resonance Imaging

(2013) Chun-Hung Yeh et al.   PLoS One

Contrast and stability of the axon diameter index from microstructure imaging with diffusion MRI

(2012) Tim B. Dyrby et al.   MAGNETIC RESONANCE IN MEDICINE

NODDI: Practical in vivo neurite orientation dispersion and density imaging of the human brain

(2012) Hui Zhang et al.   NEUROIMAGE

Random walks with barriers

(2011) Dmitry S. Novikov et al.   Nature Physics

Axon diameter mapping in the presence of orientation dispersion with diffusion MRI

(2011) Hui Zhang et al.   NEUROIMAGE

Apparent Fibre Density: A novel measure for the analysis of diffusion-weighted magnetic resonance images

(2011) David Raffelt et al.   NEUROIMAGE

Compartment models of the diffusion MR signal in brain white matter: A taxonomy and comparison

(2011) Eleftheria Panagiotaki et al.   NEUROIMAGE

The importance of axonal undulation in diffusion MR measurements: a Monte Carlo simulation study

(2011) Markus Nilsson et al.   NMR IN BIOMEDICINE

Orientationally invariant indices of axon diameter and density from diffusion MRI

(2010) Daniel C. Alexander et al.   NEUROIMAGE

Monte Carlo study of a two-compartment exchange model of diffusion

(2010) Els Fieremans et al.   NMR IN BIOMEDICINE

Convergence and Parameter Choice for Monte-Carlo Simulations of Diffusion MRI

(2009) M.G. Hall et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

A simulation environment for diffusion weighted MR experiments in complex media

(2009) Gregory T. Balls et al.   MAGNETIC RESONANCE IN MEDICINE

A software tool to generate simulated white matter structures for the assessment of fibre-tracking algorithms

(2009) Thomas G. Close et al.   NEUROIMAGE

Axcaliber: A method for measuring axon diameter distribution from diffusion MRI

(2008) Yaniv Assaf et al.   MAGNETIC RESONANCE IN MEDICINE

Simulation and experimental verification of the diffusion in an anisotropic fiber phantom

(2007) Els Fieremans et al.   JOURNAL OF MAGNETIC RESONANCE