Persistence of a Core Microbiome Through the Ontogeny of a Multi-Host Parasite

Microbiomes of the polychaete Hydroides elegans (Polychaeta: Serpulidae) across its life-history stages

(2019) Nidhi Vijayan et al.   MARINE BIOLOGY

Gut Dysbiosis and the Intestinal Microbiome: Streptococcus thermophilus a Key Probiotic for Reducing Uremia

(2019) Luis Vitetta et al.   Microorganisms

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

The role of multilevel selection in host microbiome evolution

(2019) Simon van Vliet et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbiomes as sources of emergent host phenotypes

(2019) J. B. Lynch et al.   SCIENCE

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

Helminth Microbiomes – A Hidden Treasure Trove?

(2018) T.P. Jenkins et al.   TRENDS IN PARASITOLOGY

Coordinated change at the colony level in fruit bat fur microbiomes through time

(2018) Oren Kolodny et al.   Nature Ecology & Evolution

Contamination in Low Microbial Biomass Microbiome Studies: Issues and Recommendations

(2018) Raphael Eisenhofer et al.   TRENDS IN MICROBIOLOGY

Host-specific associations affect the microbiome of Philornis downsi , an introduced parasite to the Galápagos Islands

(2017) Michael Ben-Yosef et al.   MOLECULAR ECOLOGY

Parasite Microbiome Project: Systematic Investigation of Microbiome Dynamics within and across Parasite-Host Interactions

(2017) Nolwenn M. Dheilly et al.   mSystems

The Bacteriome of Bat Flies (Nycteribiidae) from the Malagasy Region: a Community Shaped by Host Ecology, Bacterial Transmission Mode, and Host-Vector Specificity

(2016) David A. Wilkinson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity in symbiont consortia in the pea aphid complex is associated with large phenotypic variation in the insect host

(2016) Mélanie Leclair et al.   EVOLUTIONARY ECOLOGY

An Entomopathogenic Nematode Extends Its Niche by Associating with Different Symbionts

(2016) Abigail M. D. Maher et al.   MICROBIAL ECOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

The numbers game: quantitative analysis of Neorickettsia sp. propagation through complex life cycle of its digenean host using real­time qPCR

(2016) Stephen E. Greiman et al.   PARASITOLOGY RESEARCH

Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton

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Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

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Biological warfare: Microorganisms as drivers of host–parasite interactions

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Who is the puppet master? Replication of a parasitic wasp-associated virus correlates with host behaviour manipulation

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Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes

(2015) Seth R. Bordenstein et al.   PLOS BIOLOGY

Transmission rates of the bacterial endosymbiont, Neorickettsia risticii, during the asexual reproduction phase of its digenean host, Plagiorchis elegans, within naturally infected lymnaeid snails

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Animals in a bacterial world, a new imperative for the life sciences

(2013) Margaret McFall-Ngai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Long-Term Stability of the Human Gut Microbiota

(2013) J. J. Faith et al.   SCIENCE

The symbiotic role of Wolbachia in Onchocercidae and its impact on filariasis

(2012) T. Bouchery et al.   CLINICAL MICROBIOLOGY AND INFECTION

Gut microbiota instead of host genotype drive the specificity in the interaction of a natural host-parasite system

(2012) Hauke Koch et al.   ECOLOGY LETTERS

A Symbiotic View of Life: We Have Never Been Individuals

(2012) Scott F. Gilbert et al.   QUARTERLY REVIEW OF BIOLOGY

Animal Behavior and the Microbiome

(2012) V. O. Ezenwa et al.   SCIENCE

Interactions Between the Microbiota and the Immune System

(2012) L. V. Hooper et al.   SCIENCE

Rethinking microbial diversity analysis in the high throughput sequencing era

(2011) Leandro N. Lemos et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Bayesian community-wide culture-independent microbial source tracking

(2011) Dan Knights et al.   NATURE METHODS

Normal gut microbiota modulates brain development and behavior

(2011) R. D. Heijtz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Leishmania RNA Virus Controls the Severity of Mucocutaneous Leishmaniasis

(2011) A. Ives et al.   SCIENCE

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One