Exploring the Potential of CRISPR-Cas9 Under Challenging Conditions: Facing High-Copy Plasmids and Counteracting Beta-Lactam Resistance in Clinical Strains of Enterobacteriaceae

Massively parallel profiling and predictive modeling of the outcomes of CRISPR/Cas9-mediated double-strand break repair

(2019) Wei Chen et al.   NUCLEIC ACIDS RESEARCH

Molecular epidemiology of Klebsiella variicola obtained from different sources

(2019) Humberto Barrios-Camacho et al.   Scientific Reports

Extensive Gene Amplification as a Mechanism for Piperacillin-Tazobactam Resistance in Escherichia coli

(2018) Lisa M. Schechter et al.   mBio

Enhanced antibacterial effect of the novel T4-like bacteriophage KARL-1 in combination with antibiotics against multi-drug resistant Acinetobacter baumannii

(2018) Mathias Jansen et al.   Scientific Reports

Genomic and transcriptomic landscape of Escherichia coli BL21(DE3)

(2017) Sinyeon Kim et al.   NUCLEIC ACIDS RESEARCH

Whole-Genome Sequencing of Human Clinical Klebsiella pneumoniae Isolates Reveals Misidentification and Misunderstandings of Klebsiella pneumoniae , Klebsiella variicola , and Klebsiella quasipneumoniae

(2017) S. Wesley Long et al.   mSphere

Insert, remove or replace: A highly advanced genome editing system using CRISPR/Cas9

(2016) S. Antony Ceasar et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

World Health Organization Ranking of Antimicrobials According to Their Importance in Human Medicine: A Critical Step for Developing Risk Management Strategies to Control Antimicrobial Resistance From Food Animal Production

(2016) Peter C. Collignon et al.   CLINICAL INFECTIOUS DISEASES

Bacterial evolution: Resistance is a numbers game

(2016) James P. J. Hall et al.   Nature Microbiology

Multicopy plasmids potentiate the evolution of antibiotic resistance in bacteria

(2016) Alvaro San Millan et al.   Nature Ecology & Evolution

Small-Plasmid-Mediated Antibiotic Resistance Is Enhanced by Increases in Plasmid Copy Number and Bacterial Fitness

(2015) Alvaro San Millan et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

DSDecode: A Web-Based Tool for Decoding of Sequencing Chromatograms for Genotyping of Targeted Mutations

(2015) Weizhi Liu et al.   Molecular Plant

Temperate and lytic bacteriophages programmed to sensitize and kill antibiotic-resistant bacteria

(2015) Ido Yosef et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Sequence-specific antimicrobials using efficiently delivered RNA-guided nucleases

(2014) Robert J Citorik et al.   NATURE BIOTECHNOLOGY

Exploiting CRISPR-Cas nucleases to produce sequence-specific antimicrobials

(2014) David Bikard et al.   NATURE BIOTECHNOLOGY

Molecular mechanisms of antibiotic resistance

(2014) Jessica M. A. Blair et al.   NATURE REVIEWS MICROBIOLOGY

Bacterial Persister Cell Formation and Dormancy

(2013) Thomas K. Wood et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A comparison and optimization of methods and factors affecting the transformation ofEscherichia coli

(2013) Weng‑Tat Chan et al.   BIOSCIENCE REPORTS

The Variability of the 16S rRNA Gene in Bacterial Genomes and Its Consequences for Bacterial Community Analyses

(2013) Tomáš Větrovský et al.   PLoS One

Use of Galleria mellonella as a Model Organism to Study Legionella pneumophila Infection

(2013) Clare R. Harding et al.   Jove-Journal of Visualized Experiments

Rapid Protocol for Preparation of Electrocompetent Escherichia coli and Vibrio cholerae

(2013) Miguel F. Gonzales et al.   Jove-Journal of Visualized Experiments

A call for action

(2012) Patrice Savard et al.   CURRENT OPINION IN INFECTIOUS DISEASES

Identification of acquired antimicrobial resistance genes

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Rationally designed bidirectional promoter improves the evolutionary stability of synthetic genetic circuits

(2012) Song Yang et al.   NUCLEIC ACIDS RESEARCH

An end-joining repair mechanism in Escherichia coli

(2010) R. Chayot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantifying Nonspecific TEM  -Lactamase (blaTEM) Genes in a Wastewater Stream

(2008) K. L. Lachmayr et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Plasmid encoded antibiotic resistance: acquisition and transfer of antibiotic resistance genes in bacteria

(2008) P M Bennett   BRITISH JOURNAL OF PHARMACOLOGY

Quantitative Analysis of Three Hydrogenotrophic Microbial Groups, Methanogenic Archaea, Sulfate-Reducing Bacteria, and Acetogenic Bacteria, within Plaque Biofilms Associated with Human Periodontal Disease

(2008) M. E. Vianna et al.   JOURNAL OF BACTERIOLOGY