Human cytomegalovirus IE2 drives transcription initiation from a select subset of late infection viral promoters by host RNA polymerase II

Nucleotide Resolution Comparison of Transcription of Human Cytomegalovirus and Host Genomes Reveals Universal Use of RNA Polymerase II Elongation Control Driven by Dissimilar Core Promoter Elements

(2019) Mrutyunjaya Parida et al.   mBio

Genome replication affects transcription factor binding mediating the cascade of herpes simplex virus transcription

(2019) Sarah E. Dremel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An integrative approach identifies direct targets of the late viral transcription complex and an expanded promoter recognition motif in Kaposi’s sarcoma-associated herpesvirus

(2019) Divya Nandakumar et al.   PLoS Pathogens

SUMOylation of IE2p86 is required for efficient autorepression of the human cytomegalovirus major immediate-early promoter

(2018) Nina Reuter et al.   JOURNAL OF GENERAL VIROLOGY

The dTAG system for immediate and target-specific protein degradation

(2018) Behnam Nabet et al.   Nature Chemical Biology

The UCSC Genome Browser database: 2019 update

(2018) Maximilian Haeussler et al.   NUCLEIC ACIDS RESEARCH

Oxidative stress rapidly stabilizes promoter-proximal paused Pol II across the human genome

(2017) Kyle A. Nilson et al.   NUCLEIC ACIDS RESEARCH

An Essential Viral Transcription Activator Modulates Chromatin Dynamics

(2016) Rebecca L. Gibeault et al.   PLoS Pathogens

The Epstein-Barr Virus Immunoevasins BCRF1 and BPLF1 Are Expressed by a Mechanism Independent of the Canonical Late Pre-initiation Complex

(2016) Jessica McKenzie et al.   PLoS Pathogens

Differentiation-Coupled Induction of Human Cytomegalovirus Replication by Union of the Major Enhancer Retinoic Acid, Cyclic AMP, and NF-κB Response Elements

(2015) Jinxiang Yuan et al.   JOURNAL OF VIROLOGY

Global Mapping of Herpesvirus-Host Protein Complexes Reveals a Transcription Strategy for Late Genes

(2015) Zoe H. Davis et al.   MOLECULAR CELL

Phthalimide conjugation as a strategy for in vivo target protein degradation

(2015) G. E. Winter et al.   SCIENCE

Quantitative Temporal Viromics: An Approach to Investigate Host-Pathogen Interaction

(2014) Michael P. Weekes et al.   CELL

Epstein-Barr Virus Late Gene Transcription Depends on the Assembly of a Virus-Specific Preinitiation Complex

(2014) V. Aubry et al.   JOURNAL OF VIROLOGY

Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser

(2013) B. J. Raney et al.   BIOINFORMATICS

Cytomegalovirus UL91 Is Essential for Transcription of Viral True Late ( 2) Genes

(2013) S. Omoto et al.   JOURNAL OF VIROLOGY

Transcription of True Late ( 2) Cytomegalovirus Genes Requires UL92 Function That Is Conserved among Beta- and Gammaherpesviruses

(2013) S. Omoto et al.   JOURNAL OF VIROLOGY

Interaction Network of Proteins Associated with Human Cytomegalovirus IE2-p86 Protein during Infection: A Proteomic Analysis

(2013) Guixin Du et al.   PLoS One

Precise Maps of RNA Polymerase Reveal How Promoters Direct Initiation and Pausing

(2013) H. Kwak et al.   SCIENCE

A Myeloid Progenitor Cell Line Capable of Supporting Human Cytomegalovirus Latency and Reactivation, Resulting in Infectious Progeny

(2012) Christine M. O'Connor et al.   JOURNAL OF VIROLOGY

Decoding Human Cytomegalovirus

(2012) N. Stern-Ginossar et al.   SCIENCE

Host-viral effects of chromatin assembly factor 1 interaction with HCMV IE2

(2011) Sung-Bau Lee et al.   CELL RESEARCH

The Human Cytomegalovirus Gene Products Essential for Late Viral Gene Expression Assemble into Prereplication Complexes before Viral DNA Replication

(2011) H. Isomura et al.   JOURNAL OF VIROLOGY

The Human Cytomegalovirus Gene UL79 Is Required for the Accumulation of Late Viral Transcripts

(2011) Y.-C. Perng et al.   JOURNAL OF VIROLOGY

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Human Cytomegalovirus IE2 86 and IE2 40 Proteins Differentially Regulate UL84 Protein Expression Posttranscriptionally in the Absence of Other Viral Gene Products

(2010) R. L. Sanders et al.   JOURNAL OF VIROLOGY

Role of Noncovalent SUMO Binding by the Human Cytomegalovirus IE2 Transactivator in Lytic Growth

(2010) E. T. Kim et al.   JOURNAL OF VIROLOGY

High-throughput sequence analysis of variants of human cytomegalovirus strains Towne and AD169

(2009) A. J. Bradley et al.   JOURNAL OF GENERAL VIROLOGY

Breaking Human Cytomegalovirus Major Immediate-Early Gene Silence by Vasoactive Intestinal Peptide Stimulation of the Protein Kinase A-CREB-TORC2 Signaling Cascade in Human Pluripotent Embryonal NTera2 Cells

(2009) J. Yuan et al.   JOURNAL OF VIROLOGY

Development of Cell Lines That Provide Tightly Controlled Temporal Translation of the Human Cytomegalovirus IE2 Proteins for Complementation and Functional Analyses of Growth-Impaired and Nonviable IE2 Mutant Viruses

(2008) R. L. Sanders et al.   JOURNAL OF VIROLOGY

Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters

(2008) Leighton J. Core et al.   SCIENCE