Toward a High-Resolution Reconstruction of 3D Nerve Fiber Architectures and Crossings in the Brain Using Light Scattering Measurements and Finite-Difference Time-Domain Simulations

Diattenuation Imaging reveals different brain tissue properties

(2019) Miriam Menzel et al.   Scientific Reports

Ex vivo diffusion MRI of the human brain: Technical challenges and recent advances

(2018) Alard Roebroeck et al.   NMR IN BIOMEDICINE

The development of structural x-ray crystallography

(2018) M M Woolfson   PHYSICA SCRIPTA

Postmortem diffusion MRI of the entire human spinal cord at microscopic resolution

(2018) Evan Calabrese et al.   NeuroImage-Clinical

Connectome imaging for mapping human brain pathways

(2017) Y Shi et al.   MOLECULAR PSYCHIATRY

Fast high-resolution miniature two-photon microscopy for brain imaging in freely behaving mice

(2017) Weijian Zong et al.   NATURE METHODS

Decoding the microstructural correlate of diffusion MRI

(2017) Svenja Caspers et al.   NMR IN BIOMEDICINE

The challenge of mapping the human connectome based on diffusion tractography

(2017) Klaus H. Maier-Hein et al.   Nature Communications

Diattenuation of brain tissue and its impact on 3D polarized light imaging

(2017) Miriam Menzel et al.   Biomedical Optics Express

Direct Visualization and Mapping of the Spatial Course of Fiber Tracts at Microscopic Resolution in the Human Hippocampus

(2016) Michael M. Zeineh et al.   CEREBRAL CORTEX

Optical Coherence Tomography for Brain Imaging and Developmental Biology

(2016) Jing Men et al.   IEEE JOURNAL OF SELECTED TOPICS IN QUANTUM ELECTRONICS

Whole Brain Imaging with Serial Two-Photon Tomography

(2016) Stephen P. Amato et al.   Frontiers in Neuroanatomy

Light-sheet microscopy imaging of a whole cleared rat brain with Thy1-GFP transgene

(2016) Marzena Stefaniuk et al.   Scientific Reports

A Jones matrix formalism for simulating three-dimensional polarized light imaging of brain tissue

(2015) M. Menzel et al.   Journal of the Royal Society Interface

Understanding fiber mixture by simulation in 3D Polarized Light Imaging

(2015) Melanie Dohmen et al.   NEUROIMAGE

Human brain diffusion tensor imaging at submillimeter isotropic resolution on a 3 Tesla clinical MRI scanner

(2015) Hing-Chiu Chang et al.   NEUROIMAGE

Polarization microscopy for characterizing fiber orientation of ocular tissues

(2015) Ning-Jiun Jan et al.   Biomedical Optics Express

A multiscale approach for the reconstruction of the fiber architecture of the human brain based on 3D-PLI

(2015) Julia Reckfort et al.   Frontiers in Neuroanatomy

A versatile clearing agent for multi-modal brain imaging

(2015) Irene Costantini et al.   Scientific Reports

Optical coherence tomography visualizes neurons in human entorhinal cortex

(2015) Caroline Magnain et al.   Neurophotonics

Whole-Brain Imaging with Single-Cell Resolution Using Chemical Cocktails and Computational Analysis

(2014) Etsuo A. Susaki et al.   CELL

Waxholm Space atlas of the Sprague Dawley rat brain

(2014) Eszter A. Papp et al.   NEUROIMAGE

Sparkling feather reflections of a bird-of-paradise explained by finite-difference time-domain modeling

(2014) B. D. Wilts et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lipid domains control myelin basic protein adsorption and membrane interactions between model myelin lipid bilayers

(2014) D. W. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fast parallel image registration on CPU and GPU for diagnostic classification of Alzheimer's disease

(2014) Denis Shamonin   Frontiers in Neuroinformatics

Correlative two-photon and light sheet microscopy

(2013) Ludovico Silvestri et al.   METHODS

Polarized light microscopy in reproductive and developmental biology

(2013) Maki Koike-Tani et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

Mapping brain circuitry with a light microscope

(2013) Pavel Osten et al.   NATURE METHODS

BigBrain: An Ultrahigh-Resolution 3D Human Brain Model

(2013) K. Amunts et al.   SCIENCE

Visualizing hippocampal neurons with in vivo two-photon microscopy using a 1030 nm picosecond pulse laser

(2013) Ryosuke Kawakami et al.   Scientific Reports

Finite difference time domain study of light transmission through multihole nanostructures in metallic film

(2013) Mehrdad Irannejad et al.   Photonics Research

The myeloarchitectonic studies on the human cerebral cortex of the Vogt–Vogt school, and their significance for the interpretation of functional neuroimaging data

(2012) Rudolf Nieuwenhuys   Brain Structure & Function

Analysis of multipath interference in three-slit experiments

(2012) Hans De Raedt et al.   PHYSICAL REVIEW A

Brilliant camouflage: photonic crystals in the diamond weevil, Entimus imperialis

(2012) B. D. Wilts et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Comment on "The Geometric Structure of the Brain Fiber Pathways"

(2012) M. Catani et al.   SCIENCE

Response to Comment on "The Geometric Structure of the Brain Fiber Pathways"

(2012) V. J. Wedeen et al.   SCIENCE

The Geometric Structure of the Brain Fiber Pathways

(2012) V. J. Wedeen et al.   SCIENCE

The NumPy Array: A Structure for Efficient Numerical Computation

(2011) Stéfan van der Walt et al.   COMPUTING IN SCIENCE & ENGINEERING

Single myelin fiber imaging in living rodents without labeling by deep optical coherence microscopy

(2011) Juliette Ben Arous   JOURNAL OF BIOMEDICAL OPTICS

High-Resolution Fiber Tract Reconstruction in the Human Brain by Means of Three-Dimensional Polarized Light Imaging

(2011) Markus Axer et al.   Frontiers in Neuroinformatics

Scanning light-sheet microscopy in the whole mouse brain with HiLo background rejection

(2010) Jerome Mertz et al.   JOURNAL OF BIOMEDICAL OPTICS

A web-based brain atlas of the vervet monkey, Chlorocebus aethiops

(2010) Roger P. Woods et al.   NEUROIMAGE

A novel approach to the human connectome: Ultra-high resolution mapping of fiber tracts in the brain

(2010) Markus Axer et al.   NEUROIMAGE

Atlasing location, asymmetry and inter-subject variability of white matter tracts in the human brain with MR diffusion tractography

(2010) Michel Thiebaut de Schotten et al.   NEUROIMAGE

A reproducible evaluation of ANTs similarity metric performance in brain image registration

(2010) Brian B. Avants et al.   NEUROIMAGE

Calculating nonlocal optical properties of structures with arbitrary shape

(2010) Jeffrey M. McMahon et al.   PHYSICAL REVIEW B

Micro-Optical Sectioning Tomography to Obtain a High-Resolution Atlas of the Mouse Brain

(2010) A. Li et al.   SCIENCE

The human brain in numbers: a linearly scaled-up primate brain

(2009) Suzana Herculano-Houzel   Frontiers in Human Neuroscience

elastix: A Toolbox for Intensity-Based Medical Image Registration

(2009) S. Klein et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Reflectivity of the gyroid biophotonic crystals in the ventral wing scales of the Green Hairstreak butterfly, Callophrys rubi

(2009) K. Michielsen et al.   Journal of the Royal Society Interface

Refractive Index Sensing of Green Fluorescent Proteins in Living Cells Using Fluorescence Lifetime Imaging Microscopy

(2008) Henk-Jan van Manen et al.   BIOPHYSICAL JOURNAL

Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain

(2007) B AVANTS et al.   MEDICAL IMAGE ANALYSIS