A multistep deep learning framework for the automated detection and segmentation of astrocytes in fluorescent images of brain tissue

Microglia mediate HIV-1 gp120-induced synaptic degeneration in spinal pain neural circuits

(2019) Wenjuan Ru et al.   JOURNAL OF NEUROSCIENCE

ilastik: interactive machine learning for (bio)image analysis

(2019) Stuart Berg et al.   NATURE METHODS

On the design of multi-dimensional compactly supported Parseval framelets with directional characteristics

(2019) N. Atreas et al.   LINEAR ALGEBRA AND ITS APPLICATIONS

Threshold-based segmentation of fluorescent and chromogenic images of microglia, astrocytes and oligodendrocytes in FIJI

(2018) Sinead Healy et al.   JOURNAL OF NEUROSCIENCE METHODS

Directional multiscale representations and applications in digital neuron reconstruction

(2018) Cihan Kayasandik et al.   JOURNAL OF COMPUTATIONAL AND APPLIED MATHEMATICS

Seeing the wood for the trees: towards improved quantification of glial cells in central nervous system tissue

(2018) Una FitzGerald et al.   Neural Regeneration Research

Important Shapeshifter: Mechanisms Allowing Astrocytes to Respond to the Changing Nervous System During Development, Injury and Disease

(2018) Juliane Schiweck et al.   Frontiers in Cellular Neuroscience

A deep convolutional neural network approach for astrocyte detection

(2018) Ilida Suleymanova et al.   Scientific Reports

Cocaine Self-Administration and Extinction Leads to Reduced Glial Fibrillary Acidic Protein Expression and Morphometric Features of Astrocytes in the Nucleus Accumbens Core

(2016) Michael D. Scofield et al.   BIOLOGICAL PSYCHIATRY

Improved detection of soma location and morphology in fluorescence microscopy images of neurons

(2016) Cihan Bilge Kayasandik et al.   JOURNAL OF NEUROSCIENCE METHODS

Glial and Neuroimmune Mechanisms as Critical Modulators of Drug Use and Abuse

(2016) Michael J Lacagnina et al.   NEUROPSYCHOPHARMACOLOGY

Functional imaging of neuron–astrocyte interactions in a compartmentalized microfluidic device

(2016) Yandong Gao et al.   Microsystems & Nanoengineering

Quantitative 3-D analysis of GFAP labeled astrocytes from fluorescence confocal images

(2015) Prathamesh M. Kulkarni et al.   JOURNAL OF NEUROSCIENCE METHODS

Efficient Processing of Fluorescence Images Using Directional Multiscale Representations

(2014) D. Labate et al.   Mathematical Modelling of Natural Phenomena

Representation Learning: A Review and New Perspectives

(2013) Y. Bengio et al.   IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE

Emerging roles of astrocytes in neural circuit development

(2013) Laura E. Clarke et al.   NATURE REVIEWS NEUROSCIENCE

Astrocytes: The Missing Link in Neurologic Disease?

(2013) Chia-Ching John Lin et al.   Seminars in Pediatric Neurology

The Role of Astrocytes in the Regulation of Synaptic Plasticity and Memory Formation

(2013) Yusuke Ota et al.   NEURAL PLASTICITY

Annotated high-throughput microscopy image sets for validation

(2012) Vebjorn Ljosa et al.   NATURE METHODS

Edge analysis and identification using the continuous shearlet transform

(2008) Kanghui Guo et al.   APPLIED AND COMPUTATIONAL HARMONIC ANALYSIS

L-Measure: a web-accessible tool for the analysis, comparison and search of digital reconstructions of neuronal morphologies

(2008) Ruggero Scorcioni et al.   Nature Protocols

Sparse directional image representations using the discrete shearlet transform

(2007) Glenn Easley et al.   APPLIED AND COMPUTATIONAL HARMONIC ANALYSIS