Haplotype diversity underlying quantitative traits in Canadian soybean breeding germplasm

Genome-wide genetic diversity is maintained through decades of soybean breeding in Canada

(2019) Robert W. Bruce et al.   THEORETICAL AND APPLIED GENETICS

A Systematic Gene-Centric Approach to Define Haplotypes and Identify Alleles on the Basis of Dense Single Nucleotide Polymorphism Datasets

(2019) Aurélie Tardivel et al.   Plant Genome

Genome-wide Scan for Seed Composition Provides Insights into Soybean Quality Improvement and the Impacts of Domestication and Breeding

(2018) Jiaoping Zhang et al.   Molecular Plant

Molecular mapping and genomics of soybean seed protein: a review and perspective for the future

(2017) Gunvant Patil et al.   THEORETICAL AND APPLIED GENETICS

The soybean GmSNAP18 gene underlies two types of resistance to soybean cyst nematode

(2017) Shiming Liu et al.   Nature Communications

Exploring and Harnessing Haplotype Diversity to Improve Yield Stability in Crops

(2017) Lunwen Qian et al.   Frontiers in Plant Science

A Genome-Wide Association Study for Agronomic Traits in Soybean Using SNP Markers and SNP-Based Haplotype Analysis

(2017) Rodrigo Iván Contreras-Soto et al.   PLoS One

Genome-wide association study using whole-genome sequencing rapidly identifies new genes influencing agronomic traits in rice

(2016) Kenji Yano et al.   NATURE GENETICS

Mapping and identification of a potential candidate gene for a novel maturity locus, E10, in soybean

(2016) Bahram Samanfar et al.   THEORETICAL AND APPLIED GENETICS

Iterative Usage of Fixed and Random Effect Models for Powerful and Efficient Genome-Wide Association Studies

(2016) Xiaolei Liu et al.   PLoS Genetics

Fingerprinting Soybean Germplasm and Its Utility in Genomic Research

(2015) Qijian Song et al.   G3-Genes Genomes Genetics

A Population Structure and Genome-Wide Association Analysis on the USDA Soybean Germplasm Collection

(2015) Nonoy Bandillo et al.   Plant Genome

Expanding Omics Resources for Improvement of Soybean Seed Composition Traits

(2015) Juhi Chaudhary et al.   Frontiers in Plant Science

Identification of loci governing eight agronomic traits using a GBS-GWAS approach and validation by QTL mapping in soya bean

(2014) Humira Sonah et al.   PLANT BIOTECHNOLOGY JOURNAL

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

(2014) Jeffrey C. Glaubitz et al.   PLoS One

Major Soybean Maturity Gene Haplotypes Revealed by SNPViz Analysis of 72 Sequenced Soybean Genomes

(2014) Tiffany Langewisch et al.   PLoS One

A yield-associated gene TaCWI, in wheat: its function, selection and evolution in global breeding revealed by haplotype analysis

(2014) Yanmiao Jiang et al.   THEORETICAL AND APPLIED GENETICS

Rapid Identification of Alleles at the Soybean Maturity Gene E3 using genotyping by Sequencing and a Haplotype-Based Approach

(2014) Aurélie Tardivel et al.   Plant Genome

An Improved Genotyping by Sequencing (GBS) Approach Offering Increased Versatility and Efficiency of SNP Discovery and Genotyping

(2013) Humira Sonah et al.   PLoS One

CACTA-like transposable element in ZmCCT attenuated photoperiod sensitivity and accelerated the postdomestication spread of maize

(2013) Q. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of the genetic changes in a multi-generational pedigree of an elite Canadian soybean cultivar

(2013) Christopher M. Grainger et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels

(2012) Hui Li et al.   NATURE GENETICS

Genome-wide association study (GWAS) of resistance to head smut in maize

(2012) Ming Wang et al.   PLANT SCIENCE

Positional cloning and characterization reveal the molecular basis for soybean maturity locus E1 that regulates photoperiodic flowering

(2012) Z. Xia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A meta-analysis of seed protein concentration QTL in soybean

(2011) Qi Zhao-ming et al.   CANADIAN JOURNAL OF PLANT SCIENCE

A Map-Based Cloning Strategy Employing a Residual Heterozygous Line Reveals that theGIGANTEAGene Is Involved in Soybean Maturity and Flowering

(2011) Satoshi Watanabe et al.   GENETICS

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Mixed linear model approach adapted for genome-wide association studies

(2010) Zhiwu Zhang et al.   NATURE GENETICS

Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection

(2010) Hon-Ming Lam et al.   NATURE GENETICS

Map-Based Cloning of the Gene Associated With the Soybean Maturity Locus E3

(2009) Satoshi Watanabe et al.   GENETICS

SoyBase, the USDA-ARS soybean genetics and genomics database

(2009) David Grant et al.   NUCLEIC ACIDS RESEARCH

Efficient Control of Population Structure in Model Organism Association Mapping

(2008) H. M. Kang et al.   GENETICS

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE