Transcription polymerase–catalyzed emergence of novel RNA replicons

Interactive Tree Of Life (iTOL) v4: recent updates and new developments

(2019) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

3′ end additions by T7 RNA polymerase are RNA self-templated, distributive and diverse in character—RNA-Seq analyses

(2018) Yasaman Gholamalipour et al.   NUCLEIC ACIDS RESEARCH

A specific, promoter-independent activity of T7 RNA polymerase suggests a general model for DNA/RNA editing in single subunit RNA Polymerases

(2018) Subha Narayan Sarcar et al.   Scientific Reports

Viroids: “living fossils” of primordial RNAs?

(2016) Theodor O. Diener   Biology Direct

Translation readthrough mitigation

(2016) Joshua A. Arribere et al.   NATURE

Transient compartmentalization of RNA replicators prevents extinction due to parasites

(2016) S. Matsumura et al.   SCIENCE

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

RNA polymerase II acts as an RNA-dependent RNA polymerase to extend and destabilize a non-coding RNA

(2013) Stacey D Wagner et al.   EMBO JOURNAL

Ab initiosynthesis by DNA polymerases

(2013) Nadezhda V. Zyrina et al.   FEMS MICROBIOLOGY LETTERS

Evaluation of Digital PCR for Absolute RNA Quantification

(2013) Rebecca Sanders et al.   PLoS One

Molecular basis for RNA polymerization by Qβ replicase

(2012) Daijiro Takeshita et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Circularized synthetic oligodeoxynucleotides serve as promoterless RNA polymerase III templates for small RNA generation in human cells

(2012) Christine I. Seidl et al.   NUCLEIC ACIDS RESEARCH

ViennaRNA Package 2.0

(2011) Ronny Lorenz et al.   Algorithms for Molecular Biology

Compartmentalization in a Water-in-Oil Emulsion Repressed the Spontaneous Amplification of RNA by Qβ Replicase

(2010) Hiroya Urabe et al.   BIOCHEMISTRY

Mammalian microRNAs predominantly act to decrease target mRNA levels

(2010) Huili Guo et al.   NATURE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling

(2009) N. T. Ingolia et al.   SCIENCE

Viroid Replication: Rolling-Circles, Enzymes and Ribozymes

(2009) Ricardo Flores et al.   Viruses-Basel