Identification of the distribution of human endogenous retroviruses K (HML-2) by PCR-based target enrichment sequencing

Gorillas have been infected with the HERV-K (HML-2) endogenous retrovirus much more recently than humans and chimpanzees

(2019) Joseph R. Holloway et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A computational framework To assess genome-wide distribution Of polymorphic human endogenous retrovirus-K In human populations

(2019) Weiling Li et al.   PLoS Computational Biology

Human Endogenous Retrovirus-K HML-2 integration within RASGRF2 is associated with intravenous drug abuse and modulates transcription in a cell-line model

(2018) Timokratis Karamitros et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

To ERV Is Human: A Phenotype-Wide Scan Linking Polymorphic Human Endogenous Retrovirus-K Insertions to Complex Phenotypes

(2018) Amelia D. Wallace et al.   Frontiers in Genetics

Human endogenous retrovirus-K (HML-2): a comprehensive review

(2018) Marta Garcia-Montojo et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Human endogenous retroviruses role in cancer cell stemness

(2018) Claudia Matteucci et al.   SEMINARS IN CANCER BIOLOGY

Variation in proviral content among human genomes mediated by LTR recombination

(2018) Jainy Thomas et al.   Mobile DNA

Co-option of an endogenous retrovirus envelope for host defense in hominid ancestors

(2017) Daniel Blanco-Melo et al.   eLife

Friends-Enemies: Endogenous Retroviruses Are Major Transcriptional Regulators of Human DNA

(2017) Anton A. Buzdin et al.   Frontiers in Chemistry

Mutations in GLDN , Encoding Gliomedin, a Critical Component of the Nodes of Ranvier, Are Responsible for Lethal Arthrogryposis

(2016) Jérôme Maluenda et al.   AMERICAN JOURNAL OF HUMAN GENETICS

HERV-K(HML-2), a seemingly silent subtenant - but still waters run deep

(2016) Kirsten Hanke et al.   APMIS

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Discovery of unfixed endogenous retrovirus insertions in diverse human populations

(2016) Julia Halo Wildschutte et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Are human endogenous retroviruses triggers of autoimmune diseases? Unveiling associations of three diseases and viral loci

(2015) Bjørn A. Nexø et al.   IMMUNOLOGIC RESEARCH

Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells

(2015) Edward J. Grow et al.   NATURE

Genome-wide amplification of proviral sequences reveals new polymorphic HERV-K(HML-2) proviruses in humans and chimpanzees that are absent from genome assemblies

(2015) Catriona M Macfarlane et al.   Retrovirology

Human endogenous retrovirus-K contributes to motor neuron disease

(2015) Wenxue Li et al.   Science Translational Medicine

Negative Association of the HLA-DQB1*02 Allele with Breast Cancer Development among Jordanians

(2014) Manar Fayiz Atoum et al.   Asian Pacific Journal of Cancer Prevention

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Endogenous Retrovirus-K and Nervous System Diseases

(2014) Mamneet Manghera et al.   Current Neurology and Neuroscience Reports

Human endogenous retrovirus K and cancer: Innocent bystander or tumorigenic accomplice?

(2014) Ronan F. Downey et al.   INTERNATIONAL JOURNAL OF CANCER

Unfixed Endogenous Retroviral Insertions in the Human Population

(2014) E. Marchi et al.   JOURNAL OF VIROLOGY

The distribution of insertionally polymorphic endogenous retroviruses in breast cancer patients and cancer-free controls

(2014) Julia H Wildschutte et al.   Retrovirology

Identification and association study with lung cancer for novel insertion polymorphisms of human endogenous retrovirus

(2013) Tomoaki Kahyo et al.   CARCINOGENESIS

Human endogenous retrovirus K (HML-2) RNA and protein expression is a marker for human embryonic and induced pluripotent stem cells

(2013) Nina V Fuchs et al.   Retrovirology

Association of Endogenous Retroviruses and Long Terminal Repeats with Human Disorders

(2013) Iyoko Katoh et al.   Frontiers in Oncology

HERV-K(HML-2), the Best Preserved Family of HERVs: Endogenization, Expression, and Implications in Health and Disease

(2013) Oliver Hohn et al.   Frontiers in Oncology

Landscape of Somatic Retrotransposition in Human Cancers

(2012) E. Lee et al.   SCIENCE

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Identification, characterization, and comparative genomic distribution of the HERV-K (HML-2) group of human endogenous retroviruses

(2011) Ravi P Subramanian et al.   Retrovirology

The distribution of human endogenous retrovirus K-113 in health and autoimmune diseases in Poland

(2011) M. Krzysztalowska-Wawrzyniak et al.   RHEUMATOLOGY

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

A role for human endogenous retrovirus-K (HML-2) in rheumatoid arthritis: investigating mechanisms of pathogenesis

(2010) G. Freimanis et al.   CLINICAL AND EXPERIMENTAL IMMUNOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

A common variant on chromosome 11q13 is associated with atopic dermatitis

(2009) Jorge Esparza-Gordillo et al.   NATURE GENETICS

HERV-K113 Is Not Associated with Multiple Sclerosis in a Large Family-Based Study

(2008) David L. Moyes et al.   AIDS RESEARCH AND HUMAN RETROVIRUSES

HLA DR-DQ Haplotypes and Genotypes and Type 1 Diabetes Risk: Analysis of the Type 1 Diabetes Genetics Consortium Families

(2008) H. Erlich et al.   DIABETES