Unveiling new disease, pathway, and gene associations via multi-scale neural network

Visible Machine Learning for Biomedicine

(2018) Michael K. Yu et al.   CELL

Comorbidities in vitiligo: comprehensive review

(2018) Aisha M. Dahir et al.   INTERNATIONAL JOURNAL OF DERMATOLOGY

Using deep learning to model the hierarchical structure and function of a cell

(2018) Jianzhu Ma et al.   NATURE METHODS

Disulfiram reduces metastatic osteosarcoma tumor burden in an immunocompetent Balb/c or-thotopic mouse model

(2018) Jared Anthony Crasto et al.   Oncotarget

Master athletes have higher miR-7, SIRT3 and SOD2 expression in skeletal muscle than age-matched sedentary controls

(2018) Erika Koltai et al.   Redox Biology

PCID: A Novel Approach for Predicting Disease Comorbidity by Integrating Multi-Scale Data

(2017) Feng He et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

The Reactome Pathway Knowledgebase

(2017) Antonio Fabregat et al.   NUCLEIC ACIDS RESEARCH

Identifying disease-associated pathways in one-phenotype data based on reversal gene expression orderings

(2017) Guini Hong et al.   Scientific Reports

Enlightening discriminative network functional modules behind Principal Component Analysis separation in differential-omic science studies

(2017) Sara Ciucci et al.   Scientific Reports

Identification of miRNA Changes in Alzheimer's Disease Brain and CSF Yields Putative Biomarkers and Insights into Disease Pathways

(2017) John P. Cogswell et al.   JOURNAL OF ALZHEIMERS DISEASE

Adverse outcomes in patients with atrial fibrillation and peripheral arterial disease: a report from the EURObservational research programme pilot survey on atrial fibrillation

(2016) Marco Proietti et al.   EUROPACE

DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants

(2016) Janet Piñero et al.   NUCLEIC ACIDS RESEARCH

Conditional Disease Development extracted from Longitudinal Health Care Cohort Data using Layered Network Construction

(2016) Venkateshan Kannan et al.   Scientific Reports

miR-202 suppresses proliferation and induces apoptosis of osteosarcoma cells by downregulating Gli2

(2014) Zhengwen Sun et al.   MOLECULAR AND CELLULAR BIOCHEMISTRY

Temporal disease trajectories condensed from population-wide registry data covering 6.2 million patients

(2014) Anders Boeck Jensen et al.   Nature Communications

Non-segmental vitiligo and psoriasis comorbidity - a case-control study in Italian patients

(2013) M. Arunachalam et al.   JOURNAL OF THE EUROPEAN ACADEMY OF DERMATOLOGY AND VENEREOLOGY

Cancer stem cells generated by alcohol, diabetes, and hepatitis C virus

(2012) Keigo Machida et al.   JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY

The spectrum of thyroid disease and risk of new onset atrial fibrillation: a large population cohort study

(2012) C. Selmer et al.   BMJ-British Medical Journal

SLC2A1 gene analysis of Japanese patients with glucose transporter 1 deficiency syndrome

(2011) Natsuko Hashimoto et al.   JOURNAL OF HUMAN GENETICS

Ranking Candidate Disease Genes from Gene Expression and Protein Interaction: A Katz-Centrality Based Approach

(2011) Jing Zhao et al.   PLoS One

Stable feature selection for biomarker discovery

(2010) Zengyou He et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Robust biomarker identification for cancer diagnosis with ensemble feature selection methods

(2009) Thomas Abeel et al.   BIOINFORMATICS

Primary right atrial cardiac osteosarcoma with congestive heart failure

(2009) Tomotaka Dohi et al.   EUROPEAN JOURNAL OF CARDIO-THORACIC SURGERY

Disease signatures are robust across tissues and experiments

(2009) Joel T Dudley et al.   Molecular Systems Biology

Gene-Network Analysis Identifies Susceptibility Genes Related to Glycobiology in Autism

(2009) Bert van der Zwaag et al.   PLoS One

A Dynamic Network Approach for the Study of Human Phenotypes

(2009) César A. Hidalgo et al.   PLoS Computational Biology

Genetics of gene expression and its effect on disease

(2008) Valur Emilsson et al.   NATURE