Interpretation of omics data analyses

Knowledge-guided analysis of "omics" data using the KnowEnG cloud platform

(2020) Charles Blatti et al.   PLOS BIOLOGY

Integrative single-cell analysis

(2019) Tim Stuart et al.   NATURE REVIEWS GENETICS

Challenges in measuring and understanding biological noise

(2019) Nils Eling et al.   NATURE REVIEWS GENETICS

Next-Generation Sequencing and Emerging Technologies

(2019) Kishore Kumar et al.   SEMINARS IN THROMBOSIS AND HEMOSTASIS

Ten quick tips for effective dimensionality reduction

(2019) Lan Huong Nguyen et al.   PLoS Computational Biology

Quantifying the impact of public omics data

(2019) Yasset Perez-Riverol et al.   Nature Communications

Visualizing omics and clinical data: Which challenges for dealing with their variety?

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Omics, big data and machine learning as tools to propel understanding of biological mechanisms and to discover novel diagnostics and therapeutics

(2018) Nikolaos Perakakis et al.   METABOLISM-CLINICAL AND EXPERIMENTAL

Review of recent developments in GC–MS approaches to metabolomics-based research

(2018) David J. Beale et al.   Metabolomics

A comparison of multiple testing adjustment methods with block-correlation positively-dependent tests

(2017) John R. Stevens et al.   PLoS One

Framework for the quality assurance of ’omics technologies considering GLP requirements

(2017) Hans-Martin Kauffmann et al.   REGULATORY TOXICOLOGY AND PHARMACOLOGY

More Is Better: Recent Progress in Multi-Omics Data Integration Methods

(2017) Sijia Huang et al.   Frontiers in Genetics

RNA-Seq differential expression analysis: An extended review and a software tool

(2017) Juliana Costa-Silva et al.   PLoS One

Dimension reduction techniques for the integrative analysis of multi-omics data

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Principal component analysis: a review and recent developments

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OMICtools: an informative directory for multi-omic data analysis

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A survey of two-dimensional graph layout techniques for information visualisation

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Basic statistical analysis in genetic case-control studies

(2011) Geraldine M Clarke et al.   Nature Protocols