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Title
Profiling of Oral Bacterial Communities
Authors
Keywords
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Journal
JOURNAL OF DENTAL RESEARCH
Volume 99, Issue 6, Pages 621-629
Publisher
SAGE Publications
Online
2020-04-15
DOI
10.1177/0022034520914594
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- Recognizing the reagent microbiome
- (2018) Marcus C. de Goffau et al. Nature Microbiology
- The Madness of Microbiome: Attempting To Find Consensus “Best Practice” for 16S Microbiome Studies
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- (2016) Daryl M Gohl et al. NATURE BIOTECHNOLOGY
- DADA2: High-resolution sample inference from Illumina amplicon data
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- (2016) Frank Stämmler et al. Microbiome
- Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA
- (2015) Brendan J. Kelly et al. BIOINFORMATICS
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- (2011) J. Burton et al. Beneficial Microbes
- Metagenomic biomarker discovery and explanation
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- (2010) Christian L. Lauber et al. FEMS MICROBIOLOGY LETTERS
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