Symbiolite formation: a powerful in vitro model to untangle the role of bacterial communities in the photosynthesis-induced formation of microbialites
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Title
Symbiolite formation: a powerful in vitro model to untangle the role of bacterial communities in the photosynthesis-induced formation of microbialites
Authors
Keywords
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Journal
ISME Journal
Volume 14, Issue 6, Pages 1533-1546
Publisher
Springer Science and Business Media LLC
Online
2020-03-13
DOI
10.1038/s41396-020-0629-z
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- (2015) Kathrin P. Aßhauer et al. BIOINFORMATICS
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- (2008) P Claquin et al. AQUATIC MICROBIAL ECOLOGY
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- Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria)
- (2008) J. M. Gonzalez et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Microbial photosynthesis in coral reef sediments (Heron Reef, Australia)
- (2007) Ursula Werner et al. ESTUARINE COASTAL AND SHELF SCIENCE
- Cytoplasmic wax ester accumulation during biofilm-driven substrate assimilation at the alkane–water interface by Marinobacter hydrocarbonoclasticus SP17
- (2007) Benjamin Klein et al. RESEARCH IN MICROBIOLOGY
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